| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,555,608 | +GCC | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5555608 | 3 (0.050) | 50 (0.890) +GCC |
44/276 | 0.3 | 94.5% | intergenic (‑84/+87) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 5555609 = | 3 (0.050) | intergenic (‑85/+86) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer | |||||
TGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCC‑TTGTGTCGCGAAAGGGCCGCATAG‑CG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTG > NC_002947/5555470‑5555755 | actgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCg < 2:256233‑M2/3‑1 (MQ=255) gcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatggagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgcaagggccgcattgccgccCCGGcaaa > 1:237849‑M2/141‑147 (MQ=255) caggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtagcgcaagggccgcctagcggccCCGGGAAttt > 7:283985‑M2/139‑148 (MQ=255) gaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcg < 8:52399‑M2/13‑1 (MQ=255) gaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcg < 3:95179‑M2/13‑1 (MQ=255) aaattcgggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcgc > 7:146706‑M2/135‑148 (MQ=255) aaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcgc > 2:21042‑M2/135‑148 (MQ=255) aaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcgc > 8:84322‑M2/135‑148 (MQ=255) ttcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtggcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgtg < 8:144524‑M2/17‑1 (MQ=255) tcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgtg > 3:279381‑M2/131‑147 (MQ=255) aggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagtgccgcatagcggccCCGGCAATTTCCGCGTGTAt < 2:47492‑M2/20‑1 (MQ=255) ggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATg > 8:140909‑M2/128‑148 (MQ=255) cggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGca < 5:235722‑M2/23‑1 (MQ=255) cagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 4:317853‑M2/33‑1 (MQ=255) gattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgct < 7:140909‑M2/37‑1 (MQ=255) gggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc < 4:279381‑M2/44‑1 (MQ=255) cggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtgccgaaacggccgcatagggggccCCGGC‑ATTTGCGCGTGGATGCAACAAAACAGGGGCTGCGAtgcacgc > 4:33654‑M2/102‑145 (MQ=255) cggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGcc > 3:251233‑M2/101‑148 (MQ=255) acatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCt < 6:316694‑M2/50‑1 (MQ=255) cAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCC‑TTGTTTAGCGAAAGGGCCGCCTAG‑CGGCCCCGGGCATTTTCGCGGGTTTGGGACAAACCAGGGGCTGGTATGCACCCCgttagggc > 3:211562/1‑142 (MQ=255) agcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaatggccgcatagcggccCCCTCAATTTCCGCGGGTAAGCAAAAAACCTGGGGCTGCAAATCAGCCAATTcgc > 7:98269‑M2/93‑147 (MQ=255) gcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa < 1:21042‑M2/57‑1 (MQ=255) actccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcg > 8:167081‑M2/89‑142 (MQ=255) actccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcg < 7:167081‑M2/54‑1 (MQ=255) tccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttagcgaaagggccgcatagcggccCCGGGAATTTCCGCGTGTATGCAACAAACCAGGGGCTGCTATTCAGCCCATTCGCGacac > 3:78861‑M2/87‑146 (MQ=255) ccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAAACaa > 6:164177‑M2/86‑147 (MQ=255) atgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaaa < 3:33654‑M2/72‑1 (MQ=255) cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCATGGTGTCCCCCAAGGGCCGCAAAG‑GGGGCCCGGCAATTTGCGGGTGTTTGCAAAAAACCTGGGGGGGGAGTTCGCCCATATCGCCGCACAAGGCCCCCAAAGGGcc > 2:253292/1‑148 (MQ=255) cgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcg > 7:67150‑M2/71‑148 (MQ=255) cgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtagcgaaagggccgcaaagcggccCCGGCCAATTACGCGGGTATGGAACAAAACAGGGGCTGCTATGCAGCCCGTTAGCGACACAAAGCCCACAAAGGCCCccgc > 8:6306‑M2/68‑148 (MQ=255) gcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCt > 3:87392‑M2/63‑148 (MQ=255) cAACACCGCTCAGGTGTGGGAGCGGCC‑TTGTGTAGCGCAAGGGCCCCATAGCCGCC‑CCGGGAAATTACGCGTGTATGCAACAAAACAGGGGGAGCGATTCACCCCATTCGCGGCACCAGGCCCCCAAAGGACCGCGCCCGCGTCAGGc > 8:77899/1‑148 (MQ=255) aagaccgctctggtgtgggagcggcgttgtgtcgctaaagggccgcatagcggccCCGGCAATTTCCACGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTGCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGcc < 3:153861‑M2/93‑1 (MQ=255) caccgctcaggtgtgggagcggccttgtggcgcgaacgggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCg < 4:46051‑M2/95‑1 (MQ=255) ctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAc < 5:152150‑M2/99‑1 (MQ=255) aggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGc < 8:302776‑M2/103‑1 (MQ=255) gcagcggccttgtgccgcgaacgggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCt < 7:269109‑M2/110‑1 (MQ=255) ggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCGATGCAGCCCGTTAGCGACACAAGGCCCACAAAGGACCGCGCCGGCATCCGGCCCCGAACTGGCCCAGGCTGgcgc > 4:48811‑M2/34‑148 (MQ=255) cttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCa < 4:211562‑M2/118‑1 (MQ=255) gtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGc < 8:146706‑M2/120‑1 (MQ=255) gtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGc < 4:78861‑M2/120‑1 (MQ=255) tcgctaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGa < 3:153996‑M2/123‑1 (MQ=255) tcgcgaaagggccgcatagcggccCAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGa < 8:98269‑M2/123‑1 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgc < 7:6306‑M2/125‑1 (MQ=255) cgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccg < 7:77899‑M2/127‑1 (MQ=255) aaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGccc > 5:223696‑M2/20‑113 (MQ=255) ggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGat < 2:243765‑M2/133‑1 (MQ=255) gccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCcaca > 8:148327‑M2/15‑84 (MQ=255) gccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCcaca < 7:148327‑M2/70‑1 (MQ=255) gcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcatc < 7:84322‑M2/137‑1 (MQ=255) gcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCa < 7:67250‑M2/142‑1 (MQ=255) ggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAg > 4:37716‑M2/5‑111 (MQ=255) ggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAg < 3:37716‑M2/107‑1 (MQ=255) ccGGCAATTTCCGCGGGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTg < 6:84333/147‑1 (MQ=255) | TGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCC‑TTGTGTCGCGAAAGGGCCGCATAG‑CG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTG > NC_002947/5555470‑5555755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |