New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 219916 = | 59 (1.130) | 3 (0.060) | 3/258 | NT | 5.3% | coding (25422/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | 219947 = | 49 (0.970) | coding (25453/26049 nt) | PP_0168 | putative surface adhesion protein |
GATGTCATTGCCGTCCTTGGCACCGGAGATATCGAACTCGGTGTAGTGCTCGGTGATGTACTGGTGAACATTGCTGGTAGTGACAGCACCGACTTCAACACCGCTCTTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/220066‑219916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGCACTACACCGAGTTCGATATCTCCGGTGCCAAGGACGGCAATGACATCCTGTCGGGTGGCAATGGCAATGACA > NC_002947/219947‑220091 GATGTCATTGCCGTCCTTGGCACCGGAGATATCGAACTCGGTGTAGTTCTCGGTGATCTACTTATCAAAAATTCTAATAGTGACAGCACCGACTTCAACACCGCTCTTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGA > 4:4032/1‑149 GATGTCATTGCCGTCCTTGGCACCGGAGATATCGAACTCGGTGTAGTGCTCGGTGATGTACTGGTGAACATTGCTGGTAGTGACAGCACCGACTTCAACACCGCTCTTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGA < 7:2853/149‑1 TTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGACGTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGC > 1:320839/1‑118 TTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGACGTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGC < 2:320839/118‑1 AACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGACGTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGCACTACACCGAGTTCGATATCTCCGGTGCCAAGGACGGC > 4:149483/1‑148 ACGTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGCACTACACCGAGTTCGATATCTCCGGTGCCAAGGACGGCAATGACATCCTGTCGGGTGGCAATGGCAATGACA > 7:279755/1‑148 GATGTCATTGCCGTCCTTGGCACCGGAGATATCGAACTCGGTGTAGTGCTCGGTGATGTACTGGTGAACATTGCTGGTAGTGACAGCACCGACTTCAACACCGCTCTTCTGTGCAACGTACGTCTGCAGGGCCTGGTAGCCCTCGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/220066‑219916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgTACGTTGCACAGAAGAGCGGTGTTGAAGTCGGTGCTGTCACTACCAGCAATGTTCACCAGTACATCACCGAGCACTACACCGAGTTCGATATCTCCGGTGCCAAGGACGGCAATGACATCCTGTCGGGTGGCAATGGCAATGACA > NC_002947/219947‑220091 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |