New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 251781 | 44 (0.850) | 4 (0.080) | 4/252 | NT | 8.0% | intergenic (+22/‑40) | PP_0201/PP_5432 | hypothetical protein/hypothetical protein |
? | NC_002947 | = 251799 | 50 (1.010) | intergenic (+40/‑22) | PP_0201/PP_5432 | hypothetical protein/hypothetical protein |
CTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/251628‑251781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcAAGCCGTCCACGACGCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT < NC_002947/251799‑251653 CTGCTCGACCCGAGTCTTACCCGCCAAGGTGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGC > 2:197423/1‑149 CTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAG > 6:167046/1‑149 CTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAG > 7:261019/1‑149 TCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGACGCCCGCCTGGCATT < 5:265754/148‑1 CCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGACGCCCGCCTGGCATTGGTTT < 5:73169/149‑1 CCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGACGCCCGCCTGGCATTG < 1:99337/130‑1 CCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGACGCCCGCCTGGCATTG > 2:99337/1‑130 GCAAGCCGTCCACGACGCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT > 8:261019/1‑149 CTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/251628‑251781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcAAGCCGTCCACGACGCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT < NC_002947/251799‑251653 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |