| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 305248 = | 33 (0.630) | 4 (0.080) | 4/256 | NT | 11.5% | coding (718/795 nt) | PP_0251 | membrane protein |
| ? | NC_002947 | 305279 = | 30 (0.600) | coding (687/795 nt) | PP_0251 | membrane protein | |||||
CTGGGGCCTCGCAGCGCTGTTCATGCTGCCGCGCCTGGTGGCCGGTGCCCATTGGGGGCAGGACGACTACATCGGCGGCTTGCTGATGGCCGTACTGGCGCTGGGCTGGAGCTACTACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/305396‑305248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGC > NC_002947/305279‑305386 CTGGGGCCTCGCAGCGCTGTTCATGCTGCCGCGCCTGGTGGCCGGTGCCCATTGGGGGCAGGACGACTACATCGGCGGCTTGCTGATGGCCGTACTGGCGCTGGGCTGGAGCTACTACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGT > 4:139035/1‑149CTGGGGCCTCGCAGCGCTGTTCATGCTGCCGCGCCTGGTGGCCGGTGCCCATTGGGGGCAGGACGACTACATCGGCGGCTTGCTGATGGCCGTACTGGCGCTGGGCTGGAGCTACTACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGT < 5:256992/149‑1 TACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGC > 3:188509/1‑142 TACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGC < 4:188509/142‑1 GCCGCTGGCGGCCAAAGGCAGCGAGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCG < 3:54257/105‑1 GCCGCTGGCGGCCAAAGGCAGCGAGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCG > 4:54257/1‑105 CTGGGGCCTCGCAGCGCTGTTCATGCTGCCGCGCCTGGTGGCCGGTGCCCATTGGGGGCAGGACGACTACATCGGCGGCTTGCTGATGGCCGTACTGGCGCTGGGCTGGAGCTACTACACGCCGCTGGCGGCCAAAGGCAGCGAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/305396‑305248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGC > NC_002947/305279‑305386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |