New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 305248 = | 33 (0.630) | 4 (0.080) | 4/256 | NT | 11.5% | coding (718/795 nt) | PP_0251 | membrane protein |
? | NC_002947 | 305279 = | 30 (0.600) | coding (687/795 nt) | PP_0251 | membrane protein |
CAGCGGCGGCAGATTCACCAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGAGGCCCCAG > NC_002947/305101‑305396 | cagcGGCGGCAGATTCACCAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAAc < 5:32501/149‑1 (MQ=255) ggcAGATTCACCAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGc > 1:286473/1‑149 (MQ=255) aCCAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTgg > 6:8537/1‑149 (MQ=255) cAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGgcc < 8:248224/149‑1 (MQ=255) cATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCa < 1:304873/147‑1 (MQ=255) cATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCa > 2:304873/1‑147 (MQ=255) gAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAgcggc < 6:240/148‑1 (MQ=255) aTTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCTGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGc < 7:226567/149‑1 (MQ=255) gcagcgctgttcatgctgccgcgcctggtggccggtgcccattgggggcaggacgactacatcggcggcttgctgatggccgtactggcgctgggctggagctactacACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTgta > 3:188509‑M1/109‑142 (MQ=255) gcagcgctgttcatgctgccgcgcctggtggccggtgcccattgggggcaggacgactacatcggcggcttgctgatggccgtactggcgctgggctggagctactacACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTgta < 4:188509‑M1/34‑1 (MQ=255) aaTGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTg > 2:131546/1‑123 (MQ=255) aaTGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTg < 1:131546/123‑1 (MQ=255) ggggCTGCGCAGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGc < 6:18093/142‑1 (MQ=255) ggggCTGCGCAGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGc > 5:18093/1‑142 (MQ=255) ggggCTGCGCAGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTccagcc > 8:169906/1‑149 (MQ=255) tgctgcGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAgcg > 1:192483/1‑149 (MQ=255) tgcGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAgcgc > 8:17897/1‑147 (MQ=255) cgcAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCa < 5:8537/147‑1 (MQ=255) cgcAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCa < 2:64414/147‑1 (MQ=255) aGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACg > 8:250360/1‑149 (MQ=255) cccAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGc > 3:139035/1‑148 (MQ=255) ccAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCCTGTAGTAGCTCCAGCCCAGCGCCAGTACGGcc > 6:236019/1‑148 (MQ=255) aaaaaaTCTAGCACAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATc > 8:48205/1‑149 (MQ=255) aaaaaTCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCa > 7:272931/1‑149 (MQ=255) aTCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCaa < 2:286473/149‑1 (MQ=255) tCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAg > 3:238517/1‑149 (MQ=255) cggtgcccattgggggcaggacgactacatcggcggcttgctgatggccgtactggcgctgggctggagctactacACGCCTCGCTGCCTTTGGCCGCCAgcggc > 4:54257‑M1/77‑105 (MQ=255) cggtgcccattgggggcaggacgactacatcggcggcttgctgatggccgtactggcgctgggctggagctactacACGCCTCGCTGCCTTTGGCCGCCAgcggc < 3:54257‑M1/29‑1 (MQ=255) gcgcAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAgcgc > 6:256427/1‑126 (MQ=255) gcgcAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAgcgc < 5:256427/126‑1 (MQ=255) ccGACCAACGGTAACGTGGACAGCAGCTTGAGCAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGccc > 7:16823/1‑149 (MQ=255) gTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCAc < 7:155383/145‑1 (MQ=255) gTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCAc > 8:155383/1‑145 (MQ=255) gcagcTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAgg < 4:238517/149‑1 (MQ=255) gAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCgg < 7:17897/147‑1 (MQ=255) aacGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCAt > 8:75879/1‑149 (MQ=255) gcTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAg > 4:151662/1‑149 (MQ=255) gcgcATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGa < 8:16823/149‑1 (MQ=255) aaCGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGAGGccc > 5:139820/1‑147 (MQ=255) ACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGAGGCCCCAg < 5:256992‑M1/149‑1 (MQ=255) ACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGAGGCCCCAg > 4:139035‑M1/1‑149 (MQ=255) | CAGCGGCGGCAGATTCACCAGCTGCATGGAAGTTACGATTGAATGGGGCTGCTGCGCAGCCCCAAAAAATCTAGCGCAACACCGCCATTCGTCCGACCAACGGTAACGTGGACAGCAGCTTGAACAACGGCGCTGTCCAGCGCATCAACGCCTCGCTGCCTTTGGCCGCCAGCGGCGTGTAGTAGCTCCAGCCCAGCGCCAGTACGGCCATCAGCAAGCCGCCGATGTAGTCGTCCTGCCCCCAATGGGCACCGGCCACCAGGCGCGGCAGCATGAACAGCGCTGCGAGGCCCCAG > NC_002947/305101‑305396 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |