New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 543397	61 (1.170)	5 (0.100)	5/256	NT	8.6%	coding (1637/4200 nt)	rpoC	DNA‑directed RNA polymerase subunit beta'
	?	NC_002947	= 543433	47 (0.940)					coding (1673/4200 nt)	rpoC	DNA‑directed RNA polymerase subunit beta'

GTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/543247‑543397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTACAGAC  <  NC_002947/543433‑543286                                                                                                                                                                                                                                                                                                             GTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCAC                                                                                                                                                        >  4:92816/1‑149                TTCCGTCGCAGGACGTTGTACTGGGTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCTCTTTCACGGTTT                                                                                                                                         >  7:148709/1‑149                                               CTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAG                                                                                                          <  8:148709/149‑1                                                TACATGACCCGGGAAGCCATCAATCCCAACGGCGAAGGTCGCGTGTGCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGG                                                                                                         <  4:200982/149‑1                                                        CCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGG                                                                                                        >  5:61878/1‑142                                                        CCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGG                                                                                                        <  6:61878/142‑1                                                                                                                                                    ACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTACA     <  4:100513/149‑1                                                                                                                                                    ACGCTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTA       >  3:62201/1‑147                                                                                                                                                       CTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTACAGAC  <  1:83260/149‑1                                                                                                                                                       CTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTACAGAC  <  4:62201/149‑1                                                                                                                                                                                                                                                                                                             GTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTACTGGGTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/543247‑543397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcTCTTTCACGGTTTCGTTGATACGAACCTTGATTTTCGCGTGCAGGGCGGCTTCGCCGGCGCGGAATACGCGGTCGACTTCCTGCAGGTCGGCGAACACGCGACCTTCGCCCTTGGCATTGATGGCTTCCCGGGTCATGTAGTACAGAC  <  NC_002947/543433‑543286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.