New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 543397	61 (1.170)	5 (0.100)	5/256	NT	8.6%	coding (1637/4200 nt)	rpoC	DNA‑directed RNA polymerase subunit beta'
	?	NC_002947	= 543433	47 (0.940)					coding (1673/4200 nt)	rpoC	DNA‑directed RNA polymerase subunit beta'

GTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGATCTCCAAGCTGATC  >  NC_002947/543286‑543575                                                                                                                                                    |                                                                                                                                                 gTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAg                                                                                                                                                 <  1:83260‑M2/149‑2 (MQ=255) gTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAg                                                                                                                                                 <  4:62201‑M2/149‑2 (MQ=255)    tGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgt                                                                                                                                              <  4:100513‑M2/149‑5 (MQ=255)      tactacATGACCCGGGAAGCCATCAATGCCAAGGTCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGa                                                                                                                                            >  8:85176/1‑149 (MQ=255)      tactacATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgt                                                                                                                                              >  3:62201‑M2/1‑143 (MQ=255)       tagtacagACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGa                                                                                                                                            <  2:214117/141‑1 (MQ=255)       actacATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGa                                                                                                                                            <  8:266786/148‑1 (MQ=255)        ctacATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCGGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGAt                                                                                                                                           <  5:207978/148‑1 (MQ=255)        ctacATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGGATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATg                                                                                                                                          <  6:244525/149‑1 (MQ=255)            aTGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTc                                                                                                                                      >  4:145509/1‑149 (MQ=255)                cccGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCggtg                                                                                                                                  <  4:300376/149‑1 (MQ=255)                 ccGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCggtgg                                                                                                                                 >  7:148031/1‑149 (MQ=255)                   gggAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTc                                                                                                                               <  8:157980/149‑1 (MQ=255)                      aaGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAg                                                                                                                            <  6:21249/149‑1 (MQ=255)                          cATCAATGCCCAGGGCGAAGGTCGCGGGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAaca                                                                                                                        <  6:257296/149‑1 (MQ=255)                           aTCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCgg                                                                                                                                    >  5:161635/1‑136 (MQ=255)                           aTCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCgg                                                                                                                                    <  6:161635/136‑1 (MQ=255)                           aTCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAacac                                                                                                                       >  5:170712/1‑149 (MQ=255)                            tCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACAcc                                                                                                                      <  2:83260/149‑1 (MQ=255)                                tGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCa                                                                                                                  >  7:126712/1‑149 (MQ=255)                                   cAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCg                                                                                                               >  4:187633/1‑149 (MQ=255)                                   cAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCg                                                                                                               >  8:188069/1‑149 (MQ=255)                                     aGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGtt                                                                                                             <  6:130852/149‑1 (MQ=255)                                     aGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGtt                                                                                                             <  2:258303/149‑1 (MQ=255)                                     aGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGtt                                                                                                             <  8:126712/149‑1 (MQ=255)                                                         gCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑Tgc                                                                                       >  6:55576/1‑149 (MQ=255)                                                             aCCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCgctg                                                                                   >  7:51209/1‑149 (MQ=255)                                                             aCCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCgctg                                                                                   <  8:148031/149‑1 (MQ=255)                                                                tGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGctgctg                                                                                >  3:201943/1‑149 (MQ=255)                                                                 gCAGGAAGTCGACCGCATATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGt                                                                               >  8:102372/1‑149 (MQ=255)                                                                   aGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTc                                                                             >  6:21378/1‑149 (MQ=255)                                                                   aGGAAGGCGACGGCGTATTCCGGGCCGGCGAAGCCGCCCTTCACGCTAAAATCATGGTTCTTATCAACGAAACCGTGAAAGTGCGTGATGGCTCGGTGGTCAAGAAGAGCCGTTTCGTTGACACTACCGTCGGCCG‑‑TGCGCGTCTGTTc                                                                             <  8:202639/149‑1 (MQ=255)                                                                    ggAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCGGTTc                                                                             >  6:99818/1‑148 (MQ=255)                                                                     gAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTc                                                                             >  6:152529/1‑147 (MQ=255)                                                                     gAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTAGCAACGAAACCGTGCAAGCGCGTGATGGCTCGGTGGTCAAGAAGACCCTCATCGTGGGCCCCACCGGCGgcgg‑‑tgcggtgcggtgg                                                                             >  8:215373/1‑145 (MQ=255)                                                                       aGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAgg                                                                         <  3:145509/149‑1 (MQ=255)                                                                         tCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGtt                                                                       <  5:21378/149‑1 (MQ=255)                                                                           gACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTtgt                                                                     <  5:152529/149‑1 (MQ=255)                                                                            aCCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTtgtg                                                                    >  6:250898/1‑149 (MQ=255)                                                                             ccGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGc                                                                   <  6:208755/149‑1 (MQ=255)                                                                               gcgTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCg                                                                 >  6:106737/1‑149 (MQ=255)                                                                                                 aaGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGAc                                               <  5:55576/149‑1 (MQ=255)                                                                                                    ccgccCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTg                                            <  5:106737/149‑1 (MQ=255)                                                                                                       cccTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgtgcagggcggcttcgccggcgcggaatacgcggtcgacttcctgcaggtcggcgaacacgcgaccttcgcccttggcattgatggcttcccgg                                                  <  6:61878‑M2/142‑97 (MQ=255)                                                                                                       cccTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgtgcagggcggcttcgccggcgcggaatacgcggtcgacttcctgcaggtcggcgaacacgcgaccttcgcccttggcattgatggcttcccgg                                                  >  5:61878‑M2/1‑46 (MQ=255)                                                                                                        ccTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgtgcagggcggcttcgccggcgcggaatacgcggtcgacttcctgcaggtcggcgcacacgcgaccttcgccgttgggattgatggcttcccgggtcatgta                                          <  4:200982‑M2/149‑105 (MQ=255)                                                                                                         cTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAgcgtgcagggcggcttcgccggcgcggaatacgcggtcgacttcctgcaggtcggcgaacacgcgaccttcgcccttggcattgatggcttcccgggtcatgtag                                         <  8:148709‑M2/149‑106 (MQ=255)                                                                                                            cACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCa                                    <  3:187633/149‑1 (MQ=255)                                                                                                                cgAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGcc                                 >  7:24549/1‑148 (MQ=255)                                                                                                                  aaaaTCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGAt                              >  3:80133/1‑149 (MQ=255)                                                                                                                     aTCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATg                             >  5:199163/1‑147 (MQ=255)                                                                                                                      tCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATgaag                          <  7:188069/149‑1 (MQ=255)                                                                                                                        aaGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATgaaga                         <  3:92816/148‑1 (MQ=255)                                                                                                                               gTATCAACGTAAACGTGTAAGAGCGTGTTGGCTCGGTTGTCAAGAACAACCGCATCGTTGACACCACCGTCGGCCGTCTAAGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAg                    <  1:101189/148‑1 (MQ=255)                                                                                                                               gTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGc                  <  7:102372/148‑1 (MQ=255)                                                                                                                               gTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGc                  <  5:250898/148‑1 (MQ=255)                                                                                                                                tATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGa                >  7:241911/1‑149 (MQ=255)                                                                                                                                  tCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGAtc              >  8:117877/1‑149 (MQ=255)                                                                                                                                        aaaCCGTGAAAGAgcgtgcagggcggcttcgccggcgcggaatacgcggtcgacttcctgcaggtcggcgaacacgcgaccttcgcccttggcattgatggcttcccgggtcatgtagtacagacccagtacaacgtcctgcgacggaa          >  7:148709‑M2/1‑13 (MQ=255)                                                                                                                                         aaCCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGATCTCCAAGc       <  8:51209/149‑1 (MQ=255)                                                                                                                                               gAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGATCTCCAAGCTGATc  >  2:248429/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                 GTCTGTACTACATGACCCGGGAAGCCATCAATGCCAAGGGCGAAGGTCGCGTGTTCGCCGACCTGCAGGAAGTCGACCGCGTATTCCGCGCCGGCGAAGCCGCCCTGCACGCGAAAATCAAGGTTCGTATCAACGAAACCGTGAAAGAGCGTGATGGCTCGGTGGTCAAGAACACCCGCATCGTTGACACCACCGTCGGCCG‑‑TGCGCTGCTGTTCCAGGTTGTGCCGGCAGGTCTGCCGTATGACGTGGTCAACCAGCCGATGAAGAAAAAGGCGATCTCCAAGCTGATC  >  NC_002947/543286‑543575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.