New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 724297 = | 51 (0.980) | 3 (0.060) | 3/260 | NT | 5.6% | coding (334/861 nt) | PP_0618 | branched‑chain amino acid ABC transporter permease |
? | NC_002947 | 724330 = | 52 (1.020) | coding (301/861 nt) | PP_0618 | branched‑chain amino acid ABC transporter permease |
GCTGGCGCTGCTGATTGCGCCACTGGTGGTGGCCGCGCTGGCCTGGGCGGTCGAGCGCCTGTTGATCAAACGCATCTACCACCTGCCGCACACCTTCCAGATCCTCGTCACCCTCGGCATCGCGCTGATCATCCAGGAAGCGTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/724445‑724297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGTGGCGCAATCAGCAGCGCCAGCCAGAAGTTGCCGGTGACGGCCACGGCGGTGTA > NC_002947/724330‑724477 GCTGGCGCTGCTGATTGCGCCACTGGTGGTGGCCGCGCTGGCCTGGGCGGTCGAGCGCCTGTTGATCAAACGCATCTACCACCTGCCGCACACCTTCCAGATCCTCGTCACCCTCGGCATCGCGCTGATCATCCAGGAAGCGTCGGTGC < 3:311389/149‑1 CCTCGGCATCGCGCTGATCATCCAGGAAGCGTCGGTGCCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGTGGCGCAATCAGCAGCG > 6:95516/1‑149 CTCGGCATTGCGCTGATCATCCAGGAAGCGTCGGTGCCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGT < 3:219598/132‑1 CTCGGCATTGCGCTGATCATCCAGGAAGCGTCGGTGCCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGT > 4:219598/1‑132 CCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGTGGCGCAATCAGCAGCGCCAGCCAGAAGTTGCCGGTGACGGCCACGGCGGTGTA < 2:207104/149‑1 CCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGTGGCGCAATCAGCAGCGCCAGCCAGAAGTTGCCGGTGACGGCCACGGCGGTGTA < 4:184841/149‑1 GCTGGCGCTGCTGATTGCGCCACTGGTGGTGGCCGCGCTGGCCTGGGCGGTCGAGCGCCTGTTGATCAAACGCATCTACCACCTGCCGCACACCTTCCAGATCCTCGTCACCCTCGGCATCGCGCTGATCATCCAGGAAGCGTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/724445‑724297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGAGGGTGACGAGGATCTGGAAGGTGTGCGGCAGGTGGTAGATGCGTTTGATCAACAGGCGCTCGACCGCCCAGGCCAGCGCGGCCACCACCAGTGGCGCAATCAGCAGCGCCAGCCAGAAGTTGCCGGTGACGGCCACGGCGGTGTA > NC_002947/724330‑724477 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |