New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1015520 = | 45 (0.860) | 3 (0.060) | 3/248 | NT | 6.6% | coding (721/1431 nt) | PP_0875 | hypothetical protein |
? | NC_002947 | 1015571 = | 43 (0.890) | coding (670/1431 nt) | PP_0875 | hypothetical protein |
TACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1015676‑1015520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccagtCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGACCCGCAGCTGGCTCCCC > NC_002947/1015571‑1015716 TACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCG > 6:229120/1‑149 CAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCT < 4:204918/149‑1 AGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTG > 3:318541/1‑149 CCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCA < 7:173401/149‑1 GGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGC < 5:110969/139‑1 GGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGC > 6:110969/1‑139 CCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCC > 5:21193/1‑149 CTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCG > 1:157713/1‑149 AGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAAT < 2:157713/149‑1 AGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGACCCGCAGCTGGCTCCCC < 6:328788/149‑1 GTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGACCCGCAGCTGGCTCCC > 4:266791/1‑147 TACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAAAATACCCCGGCCATCGACTGGCAGCCGAGCGAGGTGCGTACCCCGCTGGCACAGATTCGCTGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1015676‑1015520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccagtCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGACCCGCAGCTGGCTCCCC > NC_002947/1015571‑1015716 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |