New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1015520 =45 (0.860)3 (0.060) 3/248 NT 6.6% coding (721/1431 nt) PP_0875 hypothetical protein
?NC_002947 1015571 = 43 (0.890)coding (670/1431 nt) PP_0875 hypothetical protein

CTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGT  >  NC_002947/1015372‑1015666
                                                                                                                                                    |                                                                                                                                                  
cTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCa                                                                                                                                                    <  6:187152/149‑1 (MQ=255)
  ggggagccagctgcgggtcagcaatgcgtttggagccatttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACt                                                                                                                                                  <  6:328788‑M1/3‑1 (MQ=255)
   gggagccagctgcgggtcagcaatgcgtttggagccatttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgAc                                                                                                                                                   >  4:266791‑M1/146‑147 (MQ=255)
   aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAGCCCTCCACGGCAGGTACCAGCCACTg                                                                                                                                                 >  4:249687/1‑149 (MQ=255)
   aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACt                                                                                                                                                  <  7:225876/148‑1 (MQ=255)
   aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACt                                                                                                                                                  <  5:71623/148‑1 (MQ=255)
              cTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCt                                                                                                                                      <  1:144854/149‑1 (MQ=255)
              cTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCt                                                                                                                                      >  1:200822/1‑149 (MQ=255)
                 gCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTTGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCtgt                                                                                                                                    <  3:203071/148‑1 (MQ=255)
                   tCAGGCCATTTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCACCGAAt                                                                                                                                        <  7:292592/142‑1 (MQ=255)
                   tCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTAGCACAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCCATGGCAGCGAAt                                                                                                                                        >  8:292592/1‑142 (MQ=255)
                    cAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAg                                                                                                                                             <  6:229782/136‑1 (MQ=255)
                    cAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGAAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAg                                                                                                                                             >  5:229782/1‑136 (MQ=255)
                      ggCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGc                                                                                                                              >  1:321402/1‑149 (MQ=255)
                                   ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTgg                                                                                                                                                >  2:41081/1‑118 (MQ=255)
                                   ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTgg                                                                                                                                                <  1:41081/118‑1 (MQ=255)
                                   ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCAc                                                                                                                   <  5:145674/147‑1 (MQ=255)
                                   ccAGGTGGCCTCAGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCCGGGTACGCGcca                                                                                                                 >  4:318541/1‑148 (MQ=255)
                                       atttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACctcgct                                                                                                             <  2:157713‑M1/40‑1 (MQ=255)
                                             tctGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTg                                                                                                       >  6:246067/1‑149 (MQ=255)
                                                ggCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCa                                                                                                    >  3:318432/1‑149 (MQ=255)
                                                 cgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAg                                                                                                   >  1:157713‑M1/100‑149 (MQ=255)
                                                    gCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCattt                                                                                                 >  1:278966/1‑145 (MQ=255)
                                                     cGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGa                                                                                               <  5:325110/149‑1 (MQ=255)
                                                     cGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGa                                                                                               <  2:200822/149‑1 (MQ=255)
                                                        ggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATgg                                                                                            >  5:21193‑M1/93‑149 (MQ=255)
                                                           ggTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCg                                                                                         >  6:212579/1‑149 (MQ=255)
                                                                  accaGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTAtt                                                                                  >  6:74738/1‑149 (MQ=255)
                                                                    cagcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCt                                                                                                        <  6:59454/125‑1 (MQ=255)
                                                                    cagcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCt                                                                                                        >  5:59454/1‑125 (MQ=255)
                                                                      gcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCg                                                                              >  3:310246/1‑149 (MQ=255)
                                                                                      cAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCa                                                              >  8:470/1‑149 (MQ=255)
                                                                                         ttGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAgcg                                                           >  2:117750/1‑149 (MQ=255)
                                                                                           ggTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGcc                                                         >  5:268422/1‑149 (MQ=255)
                                                                                             tgtTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTc                                                       <  1:128752/149‑1 (MQ=255)
                                                                                                    ccAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGcc                                                >  3:54953/1‑149 (MQ=255)
                                                                                                               aGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGcc                                     >  3:255004/1‑149 (MQ=255)
                                                                                                                  cTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCcgcg                                  >  7:105746/1‑149 (MQ=255)
                                                                                                                     gcggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGTGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCgcgc                                 <  4:318432/147‑1 (MQ=255)
                                                                                                                      cggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCAcc                              <  4:255004/149‑1 (MQ=255)
                                                                                                                       ggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCa                             <  5:246067/149‑1 (MQ=255)
                                                                                                                       ggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCa                             <  4:310246/149‑1 (MQ=255)
                                                                                                                            aaCCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACCCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCACATTCACGCACCACCTtg                        >  1:113033/1‑149 (MQ=255)
                                                                                                                               ccTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggct                     >  3:293809/1‑149 (MQ=255)
                                                                                                                               ccTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCAtggct                     >  7:220823/1‑149 (MQ=255)
                                                                                                                                cTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctg                    >  5:328788/1‑149 (MQ=255)
                                                                                                                                   cACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTggctggct                 <  7:470/149‑1 (MQ=255)
                                                                                                                                    cctacAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTGGGCTGCCAGTCTATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGgctggctg                <  8:32026/145‑1 (MQ=255)
                                                                                                                                    aCGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctgg                   <  7:274249/146‑1 (MQ=255)
                                                                                                                                    aCGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctgg                   >  8:274249/1‑146 (MQ=255)
                                                                                                                                      ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTcc                                                      >  7:180977/1‑109 (MQ=255)
                                                                                                                                      ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTcc                                                      <  8:180977/109‑1 (MQ=255)
                                                                                                                                      ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGa              <  2:278966/149‑1 (MQ=255)
                                                                                                                                           gTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATg            <  6:206616/146‑1 (MQ=255)
                                                                                                                                           gTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATg            >  5:206616/1‑146 (MQ=255)
                                                                                                                                              ccATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGcc      >  5:229120/1‑149 (MQ=255)
                                                                                                                                                aTCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCgt    >  8:19933/1‑149 (MQ=255)
                                                                                                                                                   cACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCAGGCTGGATGGTCGCCgtgt  <  8:105746/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGT  >  NC_002947/1015372‑1015666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.