New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1015520 = | 45 (0.860) | 3 (0.060) | 3/248 | NT | 6.6% | coding (721/1431 nt) | PP_0875 | hypothetical protein |
? | NC_002947 | 1015571 = | 43 (0.890) | coding (670/1431 nt) | PP_0875 | hypothetical protein |
CTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGT > NC_002947/1015372‑1015666 | cTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCa < 6:187152/149‑1 (MQ=255) ggggagccagctgcgggtcagcaatgcgtttggagccatttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACt < 6:328788‑M1/3‑1 (MQ=255) gggagccagctgcgggtcagcaatgcgtttggagccatttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgAc > 4:266791‑M1/146‑147 (MQ=255) aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAGCCCTCCACGGCAGGTACCAGCCACTg > 4:249687/1‑149 (MQ=255) aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACt < 7:225876/148‑1 (MQ=255) aaGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACt < 5:71623/148‑1 (MQ=255) cTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCt < 1:144854/149‑1 (MQ=255) cTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCt > 1:200822/1‑149 (MQ=255) gCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTTGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCtgt < 3:203071/148‑1 (MQ=255) tCAGGCCATTTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCACCGAAt < 7:292592/142‑1 (MQ=255) tCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTAGCACAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCCATGGCAGCGAAt > 8:292592/1‑142 (MQ=255) cAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAg < 6:229782/136‑1 (MQ=255) cAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGAAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAg > 5:229782/1‑136 (MQ=255) ggCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGc > 1:321402/1‑149 (MQ=255) ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTgg > 2:41081/1‑118 (MQ=255) ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTgg < 1:41081/118‑1 (MQ=255) ccAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCAc < 5:145674/147‑1 (MQ=255) ccAGGTGGCCTCAGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCCGGGTACGCGcca > 4:318541/1‑148 (MQ=255) atttacagcccgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACctcgct < 2:157713‑M1/40‑1 (MQ=255) tctGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTg > 6:246067/1‑149 (MQ=255) ggCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCa > 3:318432/1‑149 (MQ=255) cgcacacggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAg > 1:157713‑M1/100‑149 (MQ=255) gCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCattt > 1:278966/1‑145 (MQ=255) cGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGa < 5:325110/149‑1 (MQ=255) cGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGa < 2:200822/149‑1 (MQ=255) ggcgaccatccagccagccaagctggtgcgcggccttgcccgggcagtggaggcgctgggcgtatcgatctacgaaaataccccggccatcgACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATgg > 5:21193‑M1/93‑149 (MQ=255) ggTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCg > 6:212579/1‑149 (MQ=255) accaGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTAtt > 6:74738/1‑149 (MQ=255) cagcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCt < 6:59454/125‑1 (MQ=255) cagcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCt > 5:59454/1‑125 (MQ=255) gcagGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCg > 3:310246/1‑149 (MQ=255) cAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCa > 8:470/1‑149 (MQ=255) ttGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAgcg > 2:117750/1‑149 (MQ=255) ggTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGcc > 5:268422/1‑149 (MQ=255) tgtTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTc < 1:128752/149‑1 (MQ=255) ccAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGcc > 3:54953/1‑149 (MQ=255) aGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGcc > 3:255004/1‑149 (MQ=255) cTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCcgcg > 7:105746/1‑149 (MQ=255) gcggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGTGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCgcgc < 4:318432/147‑1 (MQ=255) cggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCAcc < 4:255004/149‑1 (MQ=255) ggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCa < 5:246067/149‑1 (MQ=255) ggcgTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCa < 4:310246/149‑1 (MQ=255) aaCCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACCCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCACATTCACGCACCACCTtg > 1:113033/1‑149 (MQ=255) ccTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggct > 3:293809/1‑149 (MQ=255) ccTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCAtggct > 7:220823/1‑149 (MQ=255) cTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctg > 5:328788/1‑149 (MQ=255) cACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTggctggct < 7:470/149‑1 (MQ=255) cctacAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTGGGCTGCCAGTCTATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGgctggctg < 8:32026/145‑1 (MQ=255) aCGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctgg < 7:274249/146‑1 (MQ=255) aCGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTtggctgg > 8:274249/1‑146 (MQ=255) ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTcc > 7:180977/1‑109 (MQ=255) ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTcc < 8:180977/109‑1 (MQ=255) ggCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGa < 2:278966/149‑1 (MQ=255) gTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATg < 6:206616/146‑1 (MQ=255) gTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATg > 5:206616/1‑146 (MQ=255) ccATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGcc > 5:229120/1‑149 (MQ=255) aTCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCgt > 8:19933/1‑149 (MQ=255) cACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCAGGCTGGATGGTCGCCgtgt < 8:105746/148‑1 (MQ=255) | CTGAAGGCTTGGCCCTTGCTCAGGCCAATTTGCTCCCAGGTGGCCTCTGGCAGCGGCTCGGTGGCCACCAGCAGGCTCTGTACTGGCAATTGGTGTTTGCCCAGTGGCGGCAGGCTGGCGGCGTAACCCTCCACGGCAGGTACCATCCACTGGCAGCGAATCTGTGCCAGCGGGGTACGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACTGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGT > NC_002947/1015372‑1015666 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |