| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1252645 | 44 (0.850) | 3 (0.060) | 3/256 | NT | 7.0% | coding (165/972 nt) | PP_1095 | electron transport complex protein |
| ? | NC_002947 | = 1252684 | 37 (0.740) | coding (126/972 nt) | PP_1095 | electron transport complex protein | |||||
CACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1252494‑1252645‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAGCCAATCGCTGAGCCAGGCGCTAAACGACGGCAGCGCACTGGTGACCGCCGTACTGCTGGCGGCCGCCCTGCCCACCTTGGCGCCATGGTGGCTGCCGGT < NC_002947/1252684‑1252541 CACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTG < 4:269013/149‑1CACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTG > 8:153573/1‑149CACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGCCGCCAAGCTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTCGCTCAGCGATTGGCTc > 4:305144/1‑148 ACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGC < 1:281639/149‑1 GATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGCGCCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTG > 1:22783/1‑149 CCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGCGCCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAG < 2:22783/149‑1 CGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGCGCCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAGC < 1:45619/149‑1 TGCGCCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAGCCAATCGCTGAGCCAGGCGCTAAACGACGGCAGCGCACTGGTGACCGCCGTACTGCTGGCGGCCGCCCTGCCCACCTTGGCGCCATGGTGGCTGCCG < 6:211410/147‑1 TGCGCCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAGCCAATCGCTGAGCCAGGCGCTAAACGACGGCAGCGCACTGGTGACCGCCGTACTGCTGCCGGCCGCCCTGCCAACCTTGGCGCCATGGTGGCTGCCGGT > 4:250234/1‑149 CACCGTAGGCCTGCTTGCCGATACCGATCGCGACACTTGCCGCGATGACCGGCAGCCACCATGGCGCCAAGGTGGGCAGGGCGGCCGCCAGCAGTACGGCGGTCACCAGTGCGCTGCCGTCGTTTAGCGCCTGGCTCAGCGATTGGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1252494‑1252645‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcCAGTGCCGCGCTGCTGTGCGAGGCATTGCTGCTGGCACTGCGCAGCCAATCGCTGAGCCAGGCGCTAAACGACGGCAGCGCACTGGTGACCGCCGTACTGCTGGCGGCCGCCCTGCCCACCTTGGCGCCATGGTGGCTGCCGGT < NC_002947/1252684‑1252541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |