New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 144778956 (1.080)4 (0.080) 3/256 NT 7.1% coding (1887/2178 nt) PP_1264 fusaric acid resistance protein
?NC_002947 = 1447823 51 (1.020)coding (1921/2178 nt) PP_1264 fusaric acid resistance protein

GCCTTCGAAAGCCGCACCCGCGACCTGCTGCACCAGGCCTATGGCCTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1447637‑1447789
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGGGCTTGCTCCTTGCGCAGCTCGATGACGGCGTGGCCGATCTCCAGCACGGTGAACATCCAGCCCATCAGCTGGCTCTGCACCTGCGGCTTGCCGGCCGCCA  <  NC_002947/1447823‑1447683
                                                                                                                                                                                                                                                                                                      
GCCTTCGAAAGCCGCACCCGCGACCTGCTGCACCAGGCCTATGGCCTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCG                                                                                                                                                   >  3:62701/1‑149
     CGAAAGCCGCACCCGCGACCTGCTGCACCAGGCCTATGGCCTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGC                                                                                                                                                <  7:294399/147‑1
                                             CTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGG                                                                                                      <  1:143429/149‑1
                                             CTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGG                                                                                                      <  7:58120/149‑1
                                                              GCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGGGC                                                                                                    >  3:93340/1‑134
                                                              GCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGGGC                                                                                                    <  4:93340/134‑1
                                                                                                                                                 cttGCGCCTCGGCTGCGACTCGGCTTAGGCCGGGTGCACCGGGGCGCGGGCTTGCTCCTTGCGCAGCTCGATGACGGCGTGGCCGATCTCCAGCACGGTGAACATCCAGCCCATCAGCTGGCTCTGCACCTGCGGCTTGCCGGCCGCCA  <  8:98936/146‑1
                                                                                                                                                                                                                                                                                                      
GCCTTCGAAAGCCGCACCCGCGACCTGCTGCACCAGGCCTATGGCCTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1447637‑1447789
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGGGCTTGCTCCTTGCGCAGCTCGATGACGGCGTGGCCGATCTCCAGCACGGTGAACATCCAGCCCATCAGCTGGCTCTGCACCTGCGGCTTGCCGGCCGCCA  <  NC_002947/1447823‑1447683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.