New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1447789 | 56 (1.080) | 4 (0.080) | 3/256 | NT | 7.1% | coding (1887/2178 nt) | PP_1264 | fusaric acid resistance protein |
? | NC_002947 | = 1447823 | 51 (1.020) | coding (1921/2178 nt) | PP_1264 | fusaric acid resistance protein |
CTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGA > NC_002947/1447682‑1447971 | cTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCa < 7:149822/149‑1 (MQ=255) tGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTAAGCCGAGTCGCAGCCGAggcgcaag < 8:98936‑M2/149‑9 (MQ=255) ggcggcCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGCTGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAgg < 4:62701/149‑1 (MQ=255) gcggcCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAgg < 6:238515/148‑1 (MQ=255) gcggcCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAg < 6:23366/147‑1 (MQ=255) ggcAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCg > 8:190515/1‑149 (MQ=255) gcAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCgt < 1:53876/149‑1 (MQ=255) cAAGCCGCAGGTGCAGAGCCAGCTGAGGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCgtg < 7:98936/149‑1 (MQ=255) gCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCa > 4:263484/1‑149 (MQ=255) gCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCa > 2:133287/1‑149 (MQ=255) ccGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCAt < 2:131740/149‑1 (MQ=255) cGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATg > 6:154642/1‑149 (MQ=255) cGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATg < 3:49871/149‑1 (MQ=255) gCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATgg > 2:218306/1‑149 (MQ=255) gCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATgg < 3:263484/149‑1 (MQ=255) cAGGTGCAGAGACAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg > 2:301409/1‑149 (MQ=255) gCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTg > 6:233602/1‑149 (MQ=255) cAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTgc < 7:244706/149‑1 (MQ=255) gCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTc > 4:147018/1‑149 (MQ=255) ggATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTg > 7:35786/1‑149 (MQ=255) tGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAg < 3:221920/149‑1 (MQ=255) cACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCt < 3:61732/135‑1 (MQ=255) cACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCt > 4:61732/1‑135 (MQ=255) aCCGTGCTGGAGATCGGCCTCGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCa < 8:295394/148‑1 (MQ=255) aCCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTTCGCAAGGAGCAAGCCCGCGCCGCTGTTCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCa < 8:291188/148‑1 (MQ=255) ccGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg < 1:135028/115‑1 (MQ=255) ccGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg > 2:135028/1‑115 (MQ=255) tGGAGATCGGCCACGGCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGGCGAGTCGCAGCCGTGGCGGCTGGCAATCGGTGTCATGGGCCGTGCGCTg < 3:230692/119‑1 (MQ=255) tGGAGATCGGCCACGCCGTCATCGAGCTGCGCTAGGAGCTAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTc < 7:279979/131‑1 (MQ=255) tGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTc > 8:279979/1‑131 (MQ=255) tGGAGATCGGCCACGCCGTCATCGACCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTAAGCCGAGTCGCAGCCGAGGCGCCAGGCAATCCGTGTCATGCGCCGTGCGCTg > 4:230692/1‑119 (MQ=255) ggAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGa < 6:235716/119‑1 (MQ=255) ggAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGa > 5:235716/1‑119 (MQ=255) gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGc < 5:233602/147‑1 (MQ=255) gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCaa < 5:218347/149‑1 (MQ=255) gaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAAc > 1:243134/1‑148 (MQ=255) ccACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAgc < 1:33962/149‑1 (MQ=255) ccACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAgc > 1:73491/1‑149 (MQ=255) cACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCACCAGCAACCACGAgcg < 5:21613/149‑1 (MQ=255) ccGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCa < 2:73491/149‑1 (MQ=255) cGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCAc < 1:133287/149‑1 (MQ=255) aTCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtggt < 7:190515/149‑1 (MQ=255) cTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGt < 1:301409/149‑1 (MQ=255) cAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGAcc > 4:189993/1‑149 (MQ=255) aGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCAc < 4:90983/149‑1 (MQ=255) ggAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACg > 1:151941/1‑149 (MQ=255) cAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTg > 6:74587/1‑96 (MQ=255) cAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTg < 5:74587/96‑1 (MQ=255) gCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTggcgcgggcttgctccttgcgcagctcgatgacggcgtggccgatctccagcacggtgaacatccagcccatcagctggctctgcacctgc > 3:93340‑M2/1‑43 (MQ=255) gCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTggcgcgggcttgctccttgcgcagctcgatgacggcgtggccgatctccagcacggtgaacatccagcccatcagctggctctgcacctgc < 4:93340‑M2/134‑92 (MQ=255) ccGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTggcgcgggcttgctccttgcgcagctcgatgacggcgtggccgatctccagcacggtgaacatccagcccatcagctggctctgcacctgcggcttgccggccgccag < 7:58120‑M2/149‑109 (MQ=255) ccGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTggcgcgggcttgctccttgcgcagctcgatgacggcgtggccgatctccagcacggtgaacatccagcccatcagctggctctgcacctgcggcttgccggccgccag < 1:143429‑M2/149‑109 (MQ=255) gcgcCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCcgc < 2:243134/149‑1 (MQ=255) cGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAg > 2:45195/1‑149 (MQ=255) cACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCAc < 5:31223/149‑1 (MQ=255) aCCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCAcc > 8:8577/1‑149 (MQ=255) ggCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACcgac > 5:77810/1‑148 (MQ=255) gCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACcgacga < 8:35786/149‑1 (MQ=255) cGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCg > 6:183920/1‑149 (MQ=255) aGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGCGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCAc > 4:63251/1‑149 (MQ=255) tGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGa < 1:218306/149‑1 (MQ=255) | CTGGCGGCCGGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGA > NC_002947/1447682‑1447971 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |