| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1523197 = | 52 (1.000) | 4 (0.080) | 4/254 | NT | 8.5% | coding (1105/1215 nt) | ftsW | lipid II flippase |
| ? | NC_002947 | 1523241 = | 36 (0.720) | coding (1149/1215 nt) | ftsW | lipid II flippase | |||||
CTCCTCACTGCCCAGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1523256‑1523197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG > NC_002947/1523241‑1523386 CTCCTCACTGCCCAGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATT > 3:59970/1‑142CTCCTCACTGCCCAGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATT < 4:59970/142‑1 AGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAG > 5:294599/1‑116 AGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAG < 6:294599/116‑1 cCACCTCGGCAGGGAGGAGCACGAATTCCGCGAACGCGATTTAGCCGAGGACCCCAGCCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG < 4:88035/148‑1 GCACCTGGGCAGTGAGGAGCACGAATTCAGGGAAACGGTTTTTGCCGAGGAGATCTGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATTCCCGGCGGCAGCGGGTGGCACGTATTCCCGGCGCTGGCGTTCGCCCGTGAGTTCCAG < 5:313893/149‑1 GCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG > 3:53829/1‑149 GCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG > 6:253410/1‑149 CTCCTCACTGCCCAGGTGCGTGCGGCTTTCCCACTCGATGCGCAGCAAAAGGCCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1523256‑1523197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG > NC_002947/1523241‑1523386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |