New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1523197 =	52 (1.000)	4 (0.080)	4/254	NT	8.5%	coding (1105/1215 nt)	ftsW	lipid II flippase
	?	NC_002947	1523241 =	36 (0.720)					coding (1149/1215 nt)	ftsW	lipid II flippase

AGTTCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG  >  NC_002947/1523093‑1523386                                                                                                                                                     |                                                                                                                                                  aGTTCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCgcacgcac                                                                                                                                                   <  1:66766/149‑1 (MQ=255) aGTTCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCgcacgcac                                                                                                                                                   >  6:17143/1‑149 (MQ=255)  gTTCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGCGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGAGCATCGAGTGGGAAAGCCGCACGCAcc                                                                                                                                                  >  5:153748/1‑149 (MQ=255)   ttCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCt                                                                                                                                                 >  6:11572/1‑149 (MQ=255)        gATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTggg                                                                                                                                              >  2:302737/1‑147 (MQ=255)             aCATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTgag                                                                                                                                       <  6:165888/149‑1 (MQ=255)              cATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTgagg                                                                                                                                      <  6:192323/149‑1 (MQ=255)                   gtgtGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCAc                                                                                                                                 <  7:31337/149‑1 (MQ=255)                       aatacatttttgccttcagcggccatgactggtctcctcggcaaaatcgctttcgctgaattcgtgctcctcactgcccaggTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTgaggag                                                                                                                                    <  4:59970‑M1/60‑1 (MQ=255)                       aatacatttttgccttcagcggccatgactggtctcctcggcaaaatcgctttcgctgaattcgtgctcctcactgcccaggTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTgaggag                                                                                                                                    >  3:59970‑M1/83‑142 (MQ=255)                                    cttcagcggccatgactggtctcctcggcaaaatcgctttcgctgaattcgtgctcctcactgcccaggTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCt                                                                                                                                                 >  5:294599‑M1/70‑116 (MQ=255)                                    cttcagcggccatgactggtctcctcggcaaaatcgctttcgctgaattcgtgctcctcactgcccaggTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCt                                                                                                                                                 <  6:294599‑M1/47‑1 (MQ=255)                                    ctgcCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCg                                                                                                                 <  6:34789/148‑1 (MQ=255)                                     tgcCGACCAAGTGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGAt                                                                                                               >  5:104468/1‑149 (MQ=255)                                           ccAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGcc                                                                                                         <  1:302737/149‑1 (MQ=255)                                           ccAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGcc                                                                                                         <  6:100095/149‑1 (MQ=255)                                                ggCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCgagga                                                                                                    <  5:17143/149‑1 (MQ=255)                                                ggCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACAAATTCAGCGAAAGCGATTTTGCCgagga                                                                                                    <  1:19770/149‑1 (MQ=255)                                                        ccTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGt                                                                                             >  5:300739/1‑148 (MQ=255)                                                        ccTCCCGTAACTCAGATACCGGGGGAGCTCCCTGGTGATCTGCAGCGCCTTCGTGGGGCTATTGCAGCCCATCCAGTCGGAAAGCCCCACGCACCTGCGCAGTGAGGAGCACGAATTCAGCGAAAGCGAATTTCACGAGGAGACCAGt                                                                                             >  6:313893/1‑148 (MQ=255)                                                                   tcAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCgagga                                                                                                    <  4:303023/130‑1 (MQ=255)                                                                   tcAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCgagga                                                                                                    >  3:303023/1‑130 (MQ=255)                                                                   tcAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTg                                                                                  >  8:278562/1‑148 (MQ=255)                                                                     aGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAg                                                                               <  2:268221/149‑1 (MQ=255)                                                                       ttACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCAT‑GCCGCAGAAggg                                                                             >  1:146847/1‑147 (MQ=255)                                                                         aCGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTgag                                                                                                                                       >  7:137571/1‑89 (MQ=255)                                                                                     cGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGa                                                                >  4:111491/1‑148 (MQ=255)                                                                                     cGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGAt                                                               >  4:177492/1‑149 (MQ=255)                                                                                      gCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATc                                                              <  2:56588/149‑1 (MQ=255)                                                                                         ctcctcactgcccaggtgcgtgcggctttcccactcgatgcgcagcaaaaggcccacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTAtt                                                                  <  4:59970‑M2/82‑1 (MQ=255)                                                                                         ctcctcactgcccaggtgcgtgcggctttcccactcgatgcgcagcaaaaggcccacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTAtt                                                                  >  3:59970‑M2/61‑142 (MQ=255)                                                                                          gTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATgg                                                          >  1:69311/1‑149 (MQ=255)                                                                                          gTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATgg                                                          <  6:300739/149‑1 (MQ=255)                                                                                                tgttgcGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGAACATGGCcggcg                                                    >  8:226684/4‑149 (MQ=255)                                                                                                tgctgcGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTGTTGATCATGGCcggcg                                                    >  4:161942/1‑149 (MQ=255)                                                                                                tgctgcGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCcggcg                                                    >  3:232774/1‑149 (MQ=255)                                                                                                 gctgcGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCcggcgg                                                   >  2:52426/1‑149 (MQ=255)                                                                                                  ctgcGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCcggc                                                     <  1:103317/146‑1 (MQ=255)                                                                                                      aggtgcgtgcggctttcccactcgatgcgcagcaaaaggcccacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAg                                                                               <  6:294599‑M2/69‑1 (MQ=255)                                                                                                      aggtgcgtgcggctttcccactcgatgcgcagcaaaaggcccacgcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAg                                                                               >  5:294599‑M2/48‑116 (MQ=255)                                                                                                        cTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCggg                                            >  4:310613/1‑149 (MQ=255)                                                                                                                 ccTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTa                                   <  7:278562/149‑1 (MQ=255)                                                                                                                 ccTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTa                                   >  3:14391/1‑149 (MQ=255)                                                                                                                       gctgcGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCg                             >  3:231312/1‑149 (MQ=255)                                                                                                                              aTCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTgg                      >  1:122066/1‑149 (MQ=255)                                                                                                                                  aGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGAACATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTg                  <  7:226684/149‑1 (MQ=255)                                                                                                                                         aaGCCGCACGCACCTTTGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATTTATTGATCATGGCCGGCGGCACCGGTGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGt           <  6:153748/149‑1 (MQ=255)                                                                                                                                         aaGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGt           <  2:69311/149‑1 (MQ=255)                                                                                                                                                  gcaCCTGGGCAGTGAGGAGCACGAATTCAGGGAAACGGTTTTTGCCGAGGAGATCTGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATTCCCGGCGGCAGCGGGTGGCACGTATTCCCGGCGCTGGCGTTCGCCCGTGAGTTCCAg  <  5:313893‑M2/146‑1 (MQ=255)                                                                                                                                                  gcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAg  >  6:253410‑M2/4‑149 (MQ=255)                                                                                                                                                  gcaCCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAg  >  3:53829‑M2/4‑149 (MQ=255)                                                                                                                                                  ccaCCTCGGCAGGGAGGAGCACGAATTCCGCGAACGCGATTTAGCCGAGGACCCCAGCCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAg  <  4:88035‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AGTTCCTGATCAACATCGGTGTGAACGTCGGCCTGCTGCCGACCAAGGGCCTGACCCTGCCGTTTCTCAGTTACGGGGGGAGCTCGCTGGTGATCTGCTGCGCCTGCGTGGGCCTTTTGCTGCGCATCGAGTGGGAAAGCCGCACGCACCTGGGCAGTGAGGAGCACGAATTCAGCGAAAGCGATTTTGCCGAGGAGACCAGTCATGGCCGCTGAAGGCAAAAATGTATTGATCATGGCCGGCGGCACCGGGGGGCACGTATTCCCGGCGCTGGCCTGCGCCCGTGAGTTCCAG  >  NC_002947/1523093‑1523386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.