| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2085881 = | NA (NA) | 5 (0.100) | 4/260 | NT | NA | intergenic (+590/‑5) | PP_1864/PP_1865 | hypothetical protein/transposase |
| ? | NC_002947 | 2085920 = | NA (NA) | coding (35/1302 nt) | PP_1865 | transposase | |||||
GCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086030‑2085881‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCT > NC_002947/2085920‑2086067 GCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACG < 1:266820/149‑1 CTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGC < 1:177755/149‑1 CTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGC > 2:104439/1‑149 CTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGC < 7:183872/149‑1 TTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAAAACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACc > 7:93974/1‑146 ACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATT > 2:140446/1‑149 CGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTT < 1:140446/147‑1 GCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTATTCTCGACCATTATCAAG > 3:60195/1‑119 GCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTATTCTCGACCATTATCAAG < 4:60195/119‑1 GCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGCCGGAGTGGATCGACCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAG > 1:71315/1‑149 CGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGAC < 3:115898/149‑1 CGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGAC > 6:97218/1‑149 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACC > 8:33619/1‑149 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACC < 8:159661/149‑1 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACC < 3:183091/149‑1 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACC < 1:43654/149‑1 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCACCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACC > 1:49133/1‑149 CCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCT > 6:59341/1‑149 CCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCT > 7:7133/1‑149 GCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATGGCCTGCTCCAAGGCAAGTTTGGCCATTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086030‑2085881‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCT > NC_002947/2085920‑2086067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |