| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2296807 = | 48 (0.920) | 5 (0.100) | 5/258 | NT | 9.9% | coding (3315/3645 nt) | sbcC | exonuclease subunit SbcC |
| ? | NC_002947 | 2296861 = | 44 (0.870) | coding (3261/3645 nt) | sbcC | exonuclease subunit SbcC | |||||
GCCCTGATCGGTTCGGCCTCCGGTGATGTGTTCCGCAAGATCGCCCAAGGCTACAACCTTGACCTGCTGCTGCACCACGCCAACGCCCAGCTACGTCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2296956‑2296807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGC > NC_002947/2296861‑2297007 GCCCTGATCGGTTCGGCCTCCGGTGATGTGTTCCGCAAGATCGCCCAAGGCTACAACCTTGACCTGCTGCTGCACCACGCCAACGCCCAGCTACGTCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCT > 4:171814/1‑149 TTCCGCAAGATCGCCCAAGGCTACAACCTTGACCTGCTGCTGCACCACGCCAACGCCCAGCTACGTCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGC < 3:257608/118‑1 TTCCGCAAGATCGCCCAAGGCTACAACCTTGACCTGCTGCTGCACCACGCCAACGCCCAGCTACGTCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGC > 4:257608/1‑118 TCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACCTCACCGGAGGCCGAACCGATCAGG > 3:93518/1‑149 GCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCA > 3:302505/1‑149 GCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGA < 4:302505/149‑1 GTCGCTACCGCCTCAAGCGCGGCGGCAGCGAC‑‑GGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGG > 1:303760/1‑149 CAGCGCCCTGGGCCTGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACCGCTGGTGG < 4:93518/149‑1 TGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGC > 6:241311/1‑149 GCCCTGATCGGTTCGGCCTCCGGTGATGTGTTCCGCAAGATCGCCCAAGGCTACAACCTTGACCTGCTGCTGCACCACGCCAACGCCCAGCTACGTCAGCTGGCCCGTCGCTACCGCCTCAAGCGCGGCGGCAGCGCCCTGGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2296956‑2296807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGC > NC_002947/2296861‑2297007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |