New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2296807 = | 48 (0.920) | 5 (0.100) | 5/258 | NT | 9.9% | coding (3315/3645 nt) | sbcC | exonuclease subunit SbcC |
? | NC_002947 | 2296861 = | 44 (0.870) | coding (3261/3645 nt) | sbcC | exonuclease subunit SbcC |
GGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGC > NC_002947/2296713‑2297007 | cctgatcggttcggcctccggtgaggtgttccgcaagatcgcccaaggctacaaccttgacctgctgctgcaccacgccaacgcccagctacgtCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGa > 3:93518‑M1/95‑149 (MQ=255) ccagggccagggCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACg > 3:54833/1‑148 (MQ=255) agggccagggccAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAg < 2:51514/149‑1 (MQ=255) agggccagCGACACCACGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGc < 4:97294/149‑1 (MQ=255) gccagCGACACCAGTATGGTTTCCCCGCCCGACACCGAGTCCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCCCCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGtt < 7:116927/149‑1 (MQ=255) ccagCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTg < 4:155777/149‑1 (MQ=255) cagCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGAGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTgt > 7:303344/1‑148 (MQ=255) cAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgca < 7:289927/149‑1 (MQ=255) gAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGGgtg > 6:244009/1‑141 (MQ=255) gAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGGgtg < 5:244009/141‑1 (MQ=255) aGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcag > 6:311230/1‑148 (MQ=255) gTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGcagcagcag < 6:184295/149‑1 (MQ=255) tttCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAgg < 2:84467/149‑1 (MQ=255) ccgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTg < 8:186230/149‑1 (MQ=255) cgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGt < 6:264088/149‑1 (MQ=255) gACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTa < 4:303055/149‑1 (MQ=255) aaCGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGcc > 2:122633/1‑149 (MQ=255) gTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg < 5:311230/149‑1 (MQ=255) gTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg < 2:16563/149‑1 (MQ=255) aCCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGAt < 8:172527/149‑1 (MQ=255) cGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCt > 7:207748/1‑149 (MQ=255) cGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCt < 7:73792/149‑1 (MQ=255) aGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGaa > 8:37756/1‑149 (MQ=255) gtcgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAAcaca > 6:291691/1‑148 (MQ=255) cgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCa > 6:63210/1‑149 (MQ=255) cATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCg > 7:11033/1‑148 (MQ=255) tctcGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAg > 3:306687/1‑149 (MQ=255) tcGTTGTACAGCACCAGCAGGCCCAGGGCGCTGCCTCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTTGTGCAGCATCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGAGGAACACATCACCGGAgg < 8:303344/148‑1 (MQ=255) ggTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAgg < 4:26555/146‑1 (MQ=255) ggTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCg > 6:318138/1‑149 (MQ=255) tgtCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGaa < 4:54833/149‑1 (MQ=255) tCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAAc < 5:291691/148‑1 (MQ=255) cagcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGa > 3:41364/1‑149 (MQ=255) agcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCCGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGAt < 8:207748/149‑1 (MQ=255) agcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGAt > 3:79234/1‑149 (MQ=255) accagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAg < 7:37756/149‑1 (MQ=255) tcagctggcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACCTCACCGGAGGCCGAACCGATCAgg > 3:93518‑M2/56‑149 (MQ=255) AGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGc > 4:171814‑M1/1‑149 (MQ=255) gctggcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCa > 3:302505‑M2/53‑149 (MQ=255) GCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGaa < 3:257608‑M1/118‑1 (MQ=255) GCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGaa > 4:257608‑M1/1‑118 (MQ=255) agGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCAtt < 4:41364/149‑1 (MQ=255) gcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGa < 4:302505‑M2/101‑1 (MQ=255) ccAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAgg > 7:31961/1‑149 (MQ=255) aGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCg < 1:122633/149‑1 (MQ=255) gtcgctaccgcctcaagcgcggcggcagcgacgggccagctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCggg > 1:303760‑M2/43‑149 (MQ=255) cgccgcGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGc < 4:78181/138‑1 (MQ=255) cgccgcGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGc > 3:78181/1‑138 (MQ=255) gccgcGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGtt < 4:291343/149‑1 (MQ=255) gAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCTGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCActgct > 1:69082/1‑149 (MQ=255) ggTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCtggtgg < 4:306687/149‑1 (MQ=255) cagcgccctgggcctgctgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACCGCtggtgg < 4:93518‑M2/130‑1 (MQ=255) tAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGc < 5:318138/149‑1 (MQ=255) tAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGc < 4:79234/149‑1 (MQ=255) gCCAGCTGACGTAGCTGGGAGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACAGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGAt > 3:111975/1‑149 (MQ=255) aGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTccccgaa > 7:187922/1‑143 (MQ=255) tgACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGc > 6:241311‑M2/3‑149 (MQ=255) | GGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTTCGATTTCTGC > NC_002947/2296713‑2297007 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |