| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2440084 | 52 (1.000) | 3 (0.060) | 3/248 | NT | 5.2% | coding (825/1176 nt) | pcaF‑II | beta‑ketoadipyl‑CoA thiolase subunit beta |
| ? | NC_002947 | = 2440124 | 61 (1.260) | coding (865/1176 nt) | pcaF‑II | beta‑ketoadipyl‑CoA thiolase subunit beta | |||||
GCATCGCTCAAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2439929‑2440084‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatggcaCCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAGGTAC < NC_002947/2440124‑2439978 GCATCGCTCAAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTC > 7:163417/1‑149GCATCGCTCAAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTT < 8:4349/148‑1 TCGCTCAAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGAT < 2:79086/149‑1 AAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA < 1:120352/147‑1 AAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA > 2:120352/1‑147 AAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA < 4:114991/147‑1 CTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACCCCGGCCACTGCCAT < 7:273657/149‑1 CTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCAT > 7:90081/1‑149 GCAGATCACCGACGGCGCCTCTTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAAC < 8:90081/148‑1 GATGGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGAC > 8:295396/1‑147 ATGGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAG > 6:34815/1‑149 GGCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAGG > 5:307617/1‑148 GCACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAGGT < 6:307617/148‑1 CACCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAGGTAC > 8:163417/1‑149 GCATCGCTCAAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGATCACCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2439929‑2440084‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatggcaCCGGGCCGTAGCCCATGATTGCCGGGTCGACACCGGCCACTGCCATCGAACGGATCACCGCCAATGGCTGGATACCGAGGTCCATGGCACGCTGACCGGACATGACGATCATGCACGAGGCGCCGTCGGTGATCTGCGACGAGGTAC < NC_002947/2440124‑2439978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |