New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2440084	52 (1.000)	3 (0.060)	3/248	NT	5.2%	coding (825/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta
	?	NC_002947	= 2440124	61 (1.260)					coding (865/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta

AAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAA  >  NC_002947/2439938‑2440231                                                                                                                                                     |                                                                                                                                                    aaGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA                                                                                                                                                     <  1:120352‑M1/147‑1 (MQ=255) aaGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA                                                                                                                                                     <  4:114991‑M1/147‑1 (MQ=255) aaGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCA                                                                                                                                                     >  2:120352‑M1/1‑147 (MQ=255)  aGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGGCATGTACCTCGGTATCCAGCCATTGGCGGTGATCTGTTCGATGGCAGTg                                                                                                                                                  <  6:130281/149‑1 (MQ=255)         gTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGgtg                                                                                                                                           <  5:153004/149‑1 (MQ=255)          ttCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGgtgt                                                                                                                                          >  6:66522/1‑149 (MQ=255)             aaCCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACTTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGgtgt                                                                                                                                          <  1:76082/146‑1 (MQ=255)             aaCCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGa                                                                                                                                       >  8:82405/1‑149 (MQ=255)              aCCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAGCCCCATCCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCg                                                                                                                                        <  1:109144/149‑1 (MQ=255)                 cGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCg                                                                                                                                   >  1:292105/1‑149 (MQ=255)                       gccgttcGGTCACGGCCGGTACCTCGTCGCAG‑CTCA‑CCGACGGCGCGTCGTGCATGGACGTCATGTCCGGGCAGCGTGCCATGGACCTCGGTATCCAGCCAGTCGCGGTGATCCGTTCGATGGACGTGGACGGTGTCGACCCGGCAAt                                                                                                                              >  8:211540/7‑148 (MQ=255)                       gCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATACAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAAt                                                                                                                              >  3:135504/1‑148 (MQ=255)                          gTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTTATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATg                                                                                                                          <  1:61945/149‑1 (MQ=255)                          gTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATg                                                                                                                          <  4:137086/149‑1 (MQ=255)                           tACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATgg                                                                                                                         <  7:82405/149‑1 (MQ=255)                               gTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTa                                                                                                                     >  4:10904/1‑149 (MQ=255)                                tCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTAc                                                                                                                    >  5:34815/1‑149 (MQ=255)                                   cGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGc                                                                                                                 >  1:198025/1‑149 (MQ=255)                                         gTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtg                                                                                                           >  8:163417‑M2/1‑147 (MQ=255)                                           aCCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgc                                                                                                          <  6:307617‑M2/148‑4 (MQ=255)                                            ccTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgcc                                                                                                         >  5:307617‑M2/1‑144 (MQ=255)                                             cTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAccgggccgtagcccatgattgccgggtcgaccccggccactgccat                                                                                                       <  7:273657‑M1/149‑47 (MQ=255)                                             cTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAccgggccgtagcccatgattgccgggtcgacaccggccactgccat                                                                                                       >  7:90081‑M1/1‑103 (MQ=255)                                             cTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgccat                                                                                                       >  6:34815‑M2/1‑143 (MQ=255)                                              tcgtcgCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATc                                                                                                                             >  8:161236/1‑126 (MQ=255)                                              tcgtcgCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATc                                                                                                                             <  7:161236/126‑1 (MQ=255)                                                gtcgCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgccatc                                                                                                      >  8:295396‑M2/1‑140 (MQ=255)                                                 tcgCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGAc                                                                                                   <  2:292105/149‑1 (MQ=255)                                                 tcgCAG‑ATCA‑CCGACGGCGCCTCGTACATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGAc                                                                                                   <  5:50249/149‑1 (MQ=255)                                                   gCAG‑ATCA‑CCGACGGCGCCTCTTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaac                                                                                                  <  8:90081‑M1/148‑52 (MQ=255)                                                           a‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGc                                                                                          >  4:96690/1‑149 (MQ=255)                                                                  ggCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCaa                                                                                    <  7:187447/149‑1 (MQ=255)                                                                             cATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCt                                                                         <  3:96690/149‑1 (MQ=255)                                                                                  tCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGAc                                                                     >  4:316665/1‑148 (MQ=255)                                                                                  tCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGAc                                                                     >  4:311715/1‑148 (MQ=255)                                                                                     tCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATg                                                                 >  6:85346/1‑149 (MQ=255)                                                                                       aTGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGc                                                               >  1:99996/1‑149 (MQ=255)                                                                                         gTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGcc                                                              >  3:103144/1‑148 (MQ=255)                                                                                            cGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCATTCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGat                                                           <  2:99996/148‑1 (MQ=255)                                                                                             ggTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGatat                                                         >  6:117686/1‑149 (MQ=255)                                                                                               tCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCg                                                       <  3:10904/149‑1 (MQ=255)                                                                                                cAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGa                                                      <  8:141531/149‑1 (MQ=255)                                                                                                 aGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATc                                                        <  1:69756/146‑1 (MQ=255)                                                                                                 aGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATc                                                        >  2:69756/1‑146 (MQ=255)                                                                                                 aGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGAc                                                     <  4:135504/149‑1 (MQ=255)                                                                                                 aGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGAc                                                     >  1:146572/1‑149 (MQ=255)                                                                                                    gTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACtt                                                   >  5:241453/1‑148 (MQ=255)                                                                                                        cATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc                                               >  7:76955/1‑148 (MQ=255)                                                                                                         aTGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATc                                               >  6:320812/1‑147 (MQ=255)                                                                                                         aTGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGa                                             <  6:154269/149‑1 (MQ=255)                                                                                                              ccTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTc                                         >  7:158792/1‑148 (MQ=255)                                                                                                               cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCaa                                       >  3:259905/1‑149 (MQ=255)                                                                                                               cTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCaa                                       >  3:255529/1‑149 (MQ=255)                                                                                                                 cGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAAc                                      >  2:108239/1‑148 (MQ=255)                                                                                                                   gTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGaa                                   <  8:158792/149‑1 (MQ=255)                                                                                                                        cAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCtt                              >  4:79790/1‑149 (MQ=255)                                                                                                                        cAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCtt                              >  2:131383/1‑149 (MQ=255)                                                                                                                         aGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTc                             >  7:184577/1‑149 (MQ=255)                                                                                                                                  cgggtaTCCGTTCGATGGCAGTGGCCGGTGGCGACCCGGGAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGGGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAg                    <  7:211540/144‑1 (MQ=255)                                                                                                                                   ggTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAgg                   >  2:91557/1‑149 (MQ=255)                                                                                                                                           gTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcaagaggcgccgtcggtgatctgc            <  8:90081‑M2/148‑98 (MQ=255)                                                                                                                                           gTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGccc           >  2:234070/1‑149 (MQ=255)                                                                                                                                           gTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGccc           >  1:133660/1‑149 (MQ=255)                                                                                                                                           gTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGccc           >  5:202585/1‑149 (MQ=255)                                                                                                                                               gATGGCAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgac         >  8:295396‑M1/1‑7 (MQ=255)                                                                                                                                                aTGGCAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgag      >  6:34815‑M1/1‑6 (MQ=255)                                                                                                                                                aTGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGtgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgag      >  7:90081‑M2/1‑46 (MQ=255)                                                                                                                                                aTGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCt      <  3:79790/149‑1 (MQ=255)                                                                                                                                                aTGGCAGTGGCCGGGGTCGACCCGGCAATCATGGGCTACGGCCCGGtgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgag      <  7:273657‑M2/149‑104 (MQ=255)                                                                                                                                                  ggCAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgagg     >  5:307617‑M1/1‑4 (MQ=255)                                                                                                                                                  ggCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTg     >  6:111182/1‑148 (MQ=255)                                                                                                                                                   gCAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgaggt    <  6:307617‑M1/148‑146 (MQ=255)                                                                                                                                                    cAccgggccgtagcccatgattgccgggtcgacaccggccactgccatcgaacggatcaccgccaatggctggataccgaggtccatggcacgctgaccggacatgacgatcatgcacgaggcgccgtcggtgatctgcgacgaggtac  >  8:163417‑M1/1‑2 (MQ=255)                                                                                                                                                    cAGTGGCCGGTGTCGACCCGGCAATCATGGGCTCCGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCCAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGaa   <  7:268330/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AAGCCTGCGTTCAACCCGAAAGGCGGTACGGTCACGGCCGGTACCTCGTCGCAG‑ATCA‑CCGACGGCGCCTCGTGCATGATCGTCATGTCCGGTCAGCGTGCCATGGACCTCGGTATCCAGCCATTGGCGGTGATCCGTTCGATGGCAGTGGCCGGTGTCGACCCGGCAATCATGGGCTACGGCCCGGTGCCATCGACCCAGAAAGCCCTCAAGCGTGCGGGCTTGACCATGGCCGATATCGACTTCATCGAGCTCAACGAAGCCTTCGCTGCGCAGGCCCTGCCCGTGCTGAAA  >  NC_002947/2439938‑2440231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.