| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2633732 | 38 (0.730) | 3 (0.060) | 3/250 | NT | 7.0% | coding (194/1872 nt) | PP_2304 | peptidyl‑prolyl cis‑trans isomerase D |
| ? | NC_002947 | = 2633767 | 44 (0.900) | coding (229/1872 nt) | PP_2304 | peptidyl‑prolyl cis‑trans isomerase D | |||||
CCAAGACCATCATCGGCCTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2633579‑2633732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccgGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGCATGTCGGCCGCCTGGCTCAGTTCGTTCTGGCTGATGGTCTGGCCGTTCACCTTGGCGGCGTCCTGGCTATGAGTGGCGGCCTGGAAAATGGCTTCGAAACCG < NC_002947/2633767‑2633622 CCAAGACCATCATCGGCCTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAG > 5:295230/1‑149CCAAGACCATCATCGGCCTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCAACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGCCGATCAGCCAGAACGAAATGATCCCGGCGGACCACATTCAG > 4:195600/1‑149 CTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGC < 3:88610/130‑1 CTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGC > 4:88610/1‑130 AGCCATTTTCCAGGCCGACACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAGCGCCGGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGCATG < 7:109186/149‑1 AGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAGCGCCGGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGC < 3:25609/135‑1 AGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAGCGCCGGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGC > 4:25609/1‑135 CCGGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGCATGTCGGCCGCCTGGCTCAGTTCGTTCTGGCTGATGGTCTGGCCGTTCACCTTGGCGGCGTCCTGGCTATGAGTGGCGGCCTGGAAAATGGCTTCGAAACCG < 3:207613/149‑1 CCAAGACCATCATCGGCCTTATCGTCGTGTTGATGGCATTGACCGGTTTCGAAGCCATTTTCCAGGCCGCCACTCATAGCCAGGACGCCGCCAAGGTGAACGGCCAGACCATCAGCCAGAACGAACTGAGCCAGGCGGCCGACATGCAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2633579‑2633732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccgGGTCGAAATCCTTGCCCAACTGTTGCATCAGTTGACGGCGCTGCATGTCGGCCGCCTGGCTCAGTTCGTTCTGGCTGATGGTCTGGCCGTTCACCTTGGCGGCGTCCTGGCTATGAGTGGCGGCCTGGAAAATGGCTTCGAAACCG < NC_002947/2633767‑2633622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |