| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2936886 | 57 (1.090) | 3 (0.060) | 3/250 | NT | 5.5% | coding (920/1677 nt) | PP_2569 | MHS family metabolite MFS transporter |
| ? | NC_002947 | = 2936914 | 49 (1.000) | coding (948/1677 nt) | PP_2569 | MHS family metabolite MFS transporter | |||||
GCTGCTCGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2936731‑2936886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttcttGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAG < NC_002947/2936914‑2936875 GCTGCTCGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCA > 3:50110/1‑149GCTGCTCGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCA < 6:66418/149‑1 CTGCTCGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCAT < 2:195838/149‑1 CGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCT > 6:47131/1‑149 GGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATG < 3:76334/149‑1 TACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATT < 3:31820/99‑1 TACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATT > 4:31820/1‑99 CTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAG < 7:181390/133‑1 CTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAG > 8:181390/1‑133 GCTGCTCGGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2936731‑2936886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttcttGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAG < NC_002947/2936914‑2936875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |