| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3174829 = | 34 (0.650) | 4 (0.080) | 4/248 | NT | 11.0% | coding (130/2610 nt) | PP_2787 | transporter |
| ? | NC_002947 | 3174928 = | 33 (0.680) | coding (229/2610 nt) | PP_2787 | transporter | |||||
CAACTGGCGTATGGCCTGGGACAGCTCGAACTGGGCGTTCAGCGACGTGGTGTTGAAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3174984‑3174829‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTG > NC_002947/3174928‑3175071 tAACAGGCGTTTTGCCTGGGACAGCTCGAACTGGGCGTTCAGCGACGTGGTGTTGAAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGT < 3:18241/148‑1 GCGTATGGCCTGGGACAGCTCGAACTGGGCGTTCAGCGACGTGGTGTTGAAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGT < 1:250696/147‑1 GAAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCA > 2:119573/1‑148 AAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATA > 3:130178/1‑149 GAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTC < 4:130178/149‑1 AATGATCGTCTTGCGCGCCGGGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGA < 1:119573/149‑1 TGAGTGTCTTCGACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACTGTGACGACCCTGATGCCCAGGGTTTGCTG < 5:107178/149‑1 TGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTG < 6:68328/149‑1 TCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTG > 7:254626/1‑146 CAACTGGCGTATGGCCTGGGACAGCTCGAACTGGGCGTTCAGCGACGTGGTGTTGAAGACACTCACGGGGTTGTTCAGCGCCACCATGACCGAGTCATAGGTGCCGGTGAACTCGCGCTGCAGATCAATGATCGTCTTGCGCGCCGGGTGAGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3174984‑3174829‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTG > NC_002947/3174928‑3175071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |