New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3174829 =	34 (0.650)	4 (0.080)	4/248	NT	11.0%	coding (130/2610 nt)	PP_2787	transporter
	?	NC_002947	3174928 =	33 (0.680)					coding (229/2610 nt)	PP_2787	transporter

TACACCCTCGGCGCGCTGATGTCGGACACCAATCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTG  >  NC_002947/3174781‑3175071                                                                                                                                                    |                                                                                                                                                tatggcctgggacagctcgaactgggcgttcagcgacgtggtgttgaaGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCtt                                                                                                                                                >  3:130178‑M1/49‑149 (MQ=255)   tggcctgggacagctcgaactgggcgttcagcgacgtggtgttgaaGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTc                                                                                                                                               >  2:119573‑M1/47‑148 (MQ=255)   cacCCTCGGCGCGCTGATGTCGGACACCAATCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTc                                                                                                                                               <  7:236903/148‑1 (MQ=255)                              cAATCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTc                                                                                                                    >  6:104648/1‑148 (MQ=255)                              cAATCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTc                                                                                                                    >  5:69176/1‑148 (MQ=255)                               aaTCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCACCACCACGTCGCTGAACGCCCAGTTc                                                                                                                    >  8:127051/1‑147 (MQ=255)                                    gTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCTGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGt                                                                                                             <  2:292090/149‑1 (MQ=255)                                    gTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGt                                                                                                             >  4:26138/1‑149 (MQ=255)                                            tCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGc                                                                                                      >  8:62743/1‑148 (MQ=255)                                              gaagacactcacggggttgttcagcgccaccatgaccgagtcataggtgccggtgaactcgcgctgcagatcaatgatcgtcttgcgcgccgggtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCa                                                                                                    >  2:119573‑M2/103‑148 (MQ=255)                                              aaGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCa                                                                                                    >  8:268997/1‑148 (MQ=255)                                               aagacactcacggggttgttcagcgccaccatgaccgagtcataggtgccggtgaactcgcgctgcagatcaatgatcgtcttgcgcgccgggtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATa                                                                                                  >  3:130178‑M2/102‑149 (MQ=255)                                                    ACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGc                                                                                               <  1:250696‑M1/147‑1 (MQ=255)                                                        ACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCAAAACGCCTgtta                                                                                         <  3:18241‑M1/149‑2 (MQ=255)                                                          ccGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGAt                                                                                       <  3:43241/149‑1 (MQ=255)                                                                cgcAAGACGATGATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGc                                                                                 <  4:220948/149‑1 (MQ=255)                                                                   aaGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCa                                                                                             >  2:55052/1‑134 (MQ=255)                                                                   aaGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCa                                                                                             <  1:55052/134‑1 (MQ=255)                                                                     gACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCACAGGCCATACGCCAGTTGATGCTGGc                                                                                 <  2:294686/144‑1 (MQ=255)                                                                     gACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCACAGGCCATACGCCAGTTGATGCTGGc                                                                                 >  1:294686/1‑144 (MQ=255)                                                                             ttGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGAc                                                                    <  7:268997/149‑1 (MQ=255)                                                                             ttGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGAc                                                                    <  7:62743/149‑1 (MQ=255)                                                                                   gagtcataggtgccggtgaactcgcgctgcagatcaatgatcgtcttgcgcgccgggtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTc                                                              <  4:130178‑M2/84‑1 (MQ=255)                                                                                      aGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGaa                                                           <  4:294562/149‑1 (MQ=255)                                                                                       gcgcTAGTTCACCGGCACCTATGACTCTGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTTGCGAACGATGAGGACCGTGTCGAAc                                                          <  2:230786/149‑1 (MQ=255)                                                                                        cgcgAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACt                                                         <  6:25303/149‑1 (MQ=255)                                                                                             gTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTCTCTTCGACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAgc                                                    >  6:107178/1‑149 (MQ=255)                                                                                               tCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAgcg                                                   >  1:218729/1‑148 (MQ=255)                                                                                                       aCCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCgg                                          >  3:42701/1‑149 (MQ=255)                                                                                                        ccTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCCAACTGCAGCGCATCGTCGGc                                         >  8:153047/1‑149 (MQ=255)                                                                                                         cTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGcc                                        <  3:26138/149‑1 (MQ=255)                                                                                                          tATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAAc                                                          <  5:211930/130‑1 (MQ=255)                                                                                                          tATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAAc                                                          >  6:211930/1‑130 (MQ=255)                                                                                                                      aatgatcgtcttgcgcgccgggtgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTgacga                           <  1:119573‑M2/119‑1 (MQ=255)                                                                                                                      aTGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCCAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTgacga                           >  1:267473/1‑149 (MQ=255)                                                                                                                          tggCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGAccc                        <  7:226194/148‑1 (MQ=255)                                                                                                                            gcgcTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGa                     >  5:68328/1‑149 (MQ=255)                                                                                                                              gcTGAACAACCCCTTGAGTTTCTTCAACACCACGTCGATGACCGCCCAGTTCTAGCTGTCCCATGCCATACGCGAGTTGATGCTGGCGAACGATGATGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTTACGACCCTGAt                    <  2:250696/148‑1 (MQ=255)                                                                                                                                   acaacCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAg              <  5:104648/149‑1 (MQ=255)                                                                                                                                    caacCCCGGGAGTGTCTTCAACACCACGTCGCTGTACGCCCAGTTGGAGCTGTCCCAGGCCTTACTCCAGTTGATGCTGGCGAACGATGAGGAGCTTGTCTAACTGCAGGGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAgg             <  1:305737/149‑1 (MQ=255)                                                                                                                                     aacCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAggg            <  6:69176/149‑1 (MQ=255)                                                                                                                                     aacCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAggg            >  5:172865/1‑149 (MQ=255)                                                                                                                                            tgagtgtcTTCGACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACTGTGACGACCCTGATGCCCAGGGTTTGCTg     <  5:107178‑M2/141‑1 (MQ=255)                                                                                                                                            tgagtgtcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTg     <  6:68328‑M2/141‑1 (MQ=255)                                                                                                                                                  tcTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTg  >  7:254626‑M2/3‑146 (MQ=255)                                                                                                                                                    |                                                                                                                                                TACACCCTCGGCGCGCTGATGTCGGACACCAATCCGTATCTGCTCAAGGACACTCACCCGGCGCGCAAGACGATCATTGATCTGCAGCGCGAGTTCACCGGCACCTATGACTCGGTCATGGTGGCGCTGAACAACCCCGTGAGTGTCTTCAACACCACGTCGCTGAACGCCCAGTTCGAGCTGTCCCAGGCCATACGCCAGTTGATGCTGGCGAACGATGAGGACCGTGTCGAACTGCAGCGCATCGTCGGCCTGCACAGTGACGACCCTGATGCCCAGGGTTTGCTGGTG  >  NC_002947/3174781‑3175071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.