New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3641820	48 (0.920)	3 (0.060)	3/254	NT	6.1%	coding (1385/1431 nt)	PP_3209	isoxanthopterin deaminase
	?	NC_002947	= 3641851	47 (0.950)					coding (1354/1431 nt)	PP_3209	isoxanthopterin deaminase

CAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3641709‑3641820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcTTGGACCTCGCCGAACTGGGCAGCCAGGCACGCCAGGCTG  <  NC_002947/3641851‑3641812                                                                                                                                                          CAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGCTTGGACCTCGCCGAACTGGGCAGCCAGGCACGCCAGG     <  1:306193/149‑1                                             GCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGCTTGGACCTCGCCGAACTGGGCAGCCAGGCACGCCAGGCTG  <  7:295463/108‑1                                             GCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGCTTGGACCTCGCCGAACTGGGCAGCCAGGCACGCCAGGCTG  >  8:295463/1‑108                                                                                                                                                          CAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3641709‑3641820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcTTGGACCTCGCCGAACTGGGCAGCCAGGCACGCCAGGCTG  <  NC_002947/3641851‑3641812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.