| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4031302 = | 54 (1.040) | 4 (0.080) | 4/254 | NT | 7.3% | coding (965/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | 4031336 = | 50 (1.010) | coding (999/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein | |||||
CAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4031453‑4031302‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTG > NC_002947/4031336‑4031481 CAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGC < 1:164053/148‑1CAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGC < 3:313735/148‑1 AGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAG < 2:187325/149‑1 AGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAG < 3:93487/149‑1 GTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAGG < 4:184071/149‑1 GTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGC > 4:318195/1‑147 TGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAG > 3:94977/1‑149 GTGCCTGCGGGCTAGTCGCTGCGCGGCTCTGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTAC < 7:243612/139‑1 GTGCCTGCGGGCTAGTCGCTGCGCGGCTCTGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTAC > 8:243612/1‑139 GGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTG < 3:207269/149‑1 CAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCCGAACATCACCATGGTGGATGATCGGGTCGGCCGCCTTGTCGTGTGCCTGCGGGCCAGTCGCTGCGCGGCTCTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4031453‑4031302‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCAGCAACTGGACGTGGCACGCTATGCCGAAGACGCTG > NC_002947/4031336‑4031481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |