New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4144914 =	53 (1.020)	4 (0.080)	4/250	NT	7.6%	coding (467/753 nt)	PP_3649	GntR family transcriptional regulator
	?	NC_002947	4144974 =	48 (0.980)					coding (527/753 nt)	PP_3649	GntR family transcriptional regulator

CTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4145068‑4144914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacctCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGG  >  NC_002947/4144974‑4145105                                                                                                                                                                                                                                                                                                 CTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCG                                                                                                                                            >  7:97310/1‑149       GGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGatgggc                                                                                                                                      >  6:287630/1‑143       GGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCT                                                                                                                                      >  3:48623/1‑149                                                                                              CGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGG                                               >  6:113885/1‑149                                                                                               GAGGTGGCGCGCAGGTAGCTGTTGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGC                                              >  8:237073/1‑149                                                                                                                GCTGTTGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTC                              <  7:237073/148‑1                                                                                                                                           CTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGG  <  5:113885/149‑1                                                                                                                                                                                                                                                                                                 CTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4145068‑4144914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacctCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGG  >  NC_002947/4144974‑4145105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.