| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4236304 | 47 (0.900) | 4 (0.080) | 4/256 | NT | 7.9% | coding (469/936 nt) | catA‑I | catechol 1,2‑dioxygenase |
| ? | NC_002947 | = 4236329 | 48 (0.960) | coding (444/936 nt) | catA‑I | catechol 1,2‑dioxygenase | |||||
CTGGGTTGGGCCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4236155‑4236304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCGGTGCCACCGTCGACCTGTGGCACGCCAATACCCAGGGCACCTATTCGTACTTCGATTCGACCCAGTCCGAGTTCAACCTGCGTCGGCGTATCATCACCGATGCCGAGGGCCGCTACCGCGCGCGCTCGATCGTGCCGTCCGGGTAT < NC_002947/4236329‑4236182 CTGGGTTGGGCCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGTGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTG < 5:188017/148‑1CTGGGTTGGGCCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGG < 2:92260/149‑1 TGGGTTGGGCCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGC > 2:240171/1‑149 CCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTG < 5:175339/138‑1 CCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTG > 6:175339/1‑138 GCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGC‑‑GTGCCACCGTCGACCTGTGGCAC < 2:189397/149‑1 GACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGCCGGTGCCACCGTCGACCTGTGGCACGCCAATAC < 7:286869/149‑1 GTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATGGAAGTACGAATAGGTGCCCTGGGTATTGGCCGGTGCCACCGTCGACCTGTGGCACGCCAATACCCA < 4:187656/110‑1 GTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGCCGGTGCCACCGTCGACCTGTGGCACGCCAATACCCA > 3:187656/1‑110 CCGGTGCCACCGTCGACCTGTGGCACGCCAATACCCAGGGCACCTATTCGTACTTCGATTCGACCCAGTCCGAGTTCAACCTGCGTCGGCGTATCATCACCGATGCCGAGGGCCGCTACCGCGCGCGCTCGATCGTGCCGTCCGGGTAT < 1:145471/149‑1 CTGGGTTGGGCCCTGCGGGTCGCAGCCATACCCGGACGGCACGATCGAGCGCGCGCGGTAGCGGCCCTCGGCATCGGTGATGATACGCCGACGCAGGTTGAACTCGGACTGGGTCGAATCGAAGTACGAATAGGTGCCCTGGGTATTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4236155‑4236304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCGGTGCCACCGTCGACCTGTGGCACGCCAATACCCAGGGCACCTATTCGTACTTCGATTCGACCCAGTCCGAGTTCAACCTGCGTCGGCGTATCATCACCGATGCCGAGGGCCGCTACCGCGCGCGCTCGATCGTGCCGTCCGGGTAT < NC_002947/4236329‑4236182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |