| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4433959 | 46 (0.880) | 3 (0.060) | 3/248 | NT | 6.2% | intergenic (+107/‑56) | PP_3928/PP_3929 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4433985 | 48 (0.990) | intergenic (+133/‑30) | PP_3928/PP_3929 | hypothetical protein/hypothetical protein | |||||
GCAGATCACCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4433807‑4433959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgccaAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGTT < NC_002947/4433985‑4433839 GCAGATCACCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGC > 3:104922/1‑149 AGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGC < 3:61149/149‑1 TCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGA < 7:244343/148‑1 TCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGA > 8:244343/1‑148 AGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGC > 7:51047/1‑149 CCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGT > 4:144316/1‑149 CCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGT < 5:156206/149‑1 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGTT < 1:243103/149‑1 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGTT < 5:102286/149‑1 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAG > 7:264849/1‑97 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAG < 8:264849/97‑1 GCAGATCACCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4433807‑4433959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgccaAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGACCGGCATTGATCGTTCCAAGCGTATCAACACGTTCTGGCCATGCTTGGCCGGCGGCGAAGTGCTGTGCAATGGGTCGCCTTGGCCGGGGCGTGTCGAATCAGGATGCTGGTT < NC_002947/4433985‑4433839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |