New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4548689 =	46 (0.880)	4 (0.080)	4/256	NT	6.9%	coding (1001/1440 nt)	pydB	bifunctional D‑hydantoinase/dihydropyrimidinase
	?	NC_002947	4548773 =	64 (1.280)					coding (1085/1440 nt)	pydB	bifunctional D‑hydantoinase/dihydropyrimidinase

CGCGACGAATTCGTGCATCGACAAACGCCCGCTGTTGACCCCGGCATCCCACAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4548786‑4548689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTGGGTGCCGATGCCGACCTGGTGCTGTGGGACCCGCAGGGCACCCGCACCATCTCCGCCAAAACCCACCAC  >  NC_002947/4548773‑4548918                                                                                                                                                                                                                                                      CGCGACGAATTCGTGCATCGACAAACGCCCGCTGTTGACCCCGGCATCCCACAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGCACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGT                                                                                                 >  4:190850/1‑149             GTGCATCGACAAACGCCCGCTGTTGACCCCGGCATCCCACAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGCACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGG                                                                                     >  4:254532/1‑149                           GCCCGCTGTTGACCCCGGCATCCCACAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGCACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTG                                                                       <  3:254532/149‑1                                                    CAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGCACTAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTGGGTGCCGATGCCGACCTGGTGCTGT                                              <  3:190850/149‑1                                                                                               ATGCACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTGGGTGCCGATGCCGACCTGGTGCTGTGGGACCCGCAGGGCACCCGCACCATCTCCGCCAAAACCCACCA   >  2:146424/1‑149                                                                                                 GCACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTGGGTGCCGATGCCGACCTGGTGCTGTGGGACCCGCAGGGCACCCGCACCATCTCCGCCAAAACCCACCAC  >  3:34256/1‑148                                                                                                                                                                                                                                                      CGCGACGAATTCGTGCATCGACAAACGCCCGCTGTTGACCCCGGCATCCCACAGTACTGCCATGCGGTCTTCGATGCCGGCGGTGCCGTTGGGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4548786‑4548689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcACGAATTCGTCGCGCTGACCTCTACCAACACGGCGAAAATCTTCAACCTGTTCCCGCGCAAGGGCGCTATCCGCGTGGGTGCCGATGCCGACCTGGTGCTGTGGGACCCGCAGGGCACCCGCACCATCTCCGCCAAAACCCACCAC  >  NC_002947/4548773‑4548918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.