| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4674602 = | 40 (0.770) | 5 (0.100) | 3/254 | NT | 10.2% | coding (1374/2073 nt) | PP_4137 | outer membrane siderophore receptor |
| ? | NC_002947 | 4674651 = | 50 (1.010) | coding (1423/2073 nt) | PP_4137 | outer membrane siderophore receptor | |||||
TAGTACCAGGCCAGGTCCCAGCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4674754‑4674602‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCCTGGTACTACTCGCAAGTACGCCACGAACTGCTGGCCGTTGAGGTAGTGCC > NC_002947/4674651‑4674796 TAGTACCAGGCCAGGTCCCAGCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGG < 2:197887/149‑1 CCAGGCCAGGTCCCAGCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGC < 3:2727/148‑1 GCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGG > 7:66417/1‑129 GCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGG < 8:66417/129‑1 GCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGGTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACGACGGGTGTGc > 2:145554/1‑125 GCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGCAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCC > 8:299296/1‑149 GCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGCAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCC > 8:303530/1‑149 CTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGCAAGCAGATCCAGCCGATCGAGATCCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTG < 2:26489/116‑1 CGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGCAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCCTGGTAC < 7:299296/149‑1 CGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGCAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCCTGGTAC < 7:303530/149‑1 GCAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCCTGGTACTACTCGCAAGTACGCCACGAACTGCTAGCCGTTGAGGTAGTGCC > 2:173093/1‑148 TAGTACCAGGCCAGGTCCCAGCGGCCGAGCGCCGAGTCGCCACGGGCGCCCAGTTCCAGGGTGGTGGCTGTCTGGTTCTGCATCTCGATCGGCTGGATCTGCTTGCCGCCTGTGCTGGGCGCGCTCCAGATCAGCGACCACGGGTGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4674754‑4674602‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcAAGCAGATCCAGCCGATCGAGATGCAGAACCAGACAGCCACCACCCTGGAACTGGGCGCCCGTGGCGACTCGGCGCTCGGCCGCTGGGACCTGGCCTGGTACTACTCGCAAGTACGCCACGAACTGCTGGCCGTTGAGGTAGTGCC > NC_002947/4674651‑4674796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |