| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4695719 = | 48 (0.920) | 4 (0.080) | 4/252 | NT | 8.2% | coding (565/1224 nt) | PP_4155 | amine oxidase |
| ? | NC_002947 | 4695775 = | 44 (0.890) | coding (509/1224 nt) | PP_4155 | amine oxidase | |||||
GCCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4695869‑4695719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaacGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCATCTGCTTTCACGCCACCCAACTC > NC_002947/4695775‑4695920 GCCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGC < 2:199444/148‑1GCCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGC > 6:198735/1‑148 CCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAA < 2:64510/149‑1 CCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAA < 7:131330/149‑1 GCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCT > 1:139056/1‑149 TTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTC > 3:206566/1‑147 TTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTC < 4:206566/147‑1 CCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCA > 5:258927/1‑148 CGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCAT > 5:62798/1‑131 CGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCAT < 6:62798/131‑1 GGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCATCTGCTTTCACGCCACCCAA > 7:18903/1‑149 ACGCCCCGCCGCGTGACGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGCCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCATCTGCTTTCACGCCACCCAACTC > 5:230920/1‑148 GCCGAGAACCCATTGGCCGCTGTTGCACTTCAACATGGCTTGGCTTGCGTCGAGACCGATTTCAGTTGCCCGCTTGCAGCGGCACGCGGCGGGGCGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4695869‑4695719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaacGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCTCGGCAAAATGCTGAAGCCATGCCGCACCTTCATCTGCTTTCACGCCACCCAACTC > NC_002947/4695775‑4695920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |