New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4695719 = | 48 (0.920) | 4 (0.080) | 4/252 | NT | 8.2% | coding (565/1224 nt) | PP_4155 | amine oxidase |
? | NC_002947 | 4695775 = | 44 (0.890) | coding (509/1224 nt) | PP_4155 | amine oxidase |
CCCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCT > NC_002947/4695571‑4695865 | cccTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGgttg > 5:227687/1‑149 (MQ=255) gagttgggtggcgtgaaagcagatgaaggtgcggcatggcttcagcattttgccgagaacccattgggcgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcgtcacgcggcggggcGt > 5:230920‑M1/147‑148 (MQ=255) ctctTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGgttgtt < 4:76873/149‑1 (MQ=255) ctTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGc > 3:218679/1‑149 (MQ=255) ttgggtggcgtgaaagcagatgaaggtgcggcatggcttcagcattttgccgagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGcc > 7:18903‑M1/144‑149 (MQ=255) ttCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGAT‑GCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGc < 3:26678/147‑1 (MQ=255) aTCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGa < 2:25695/148‑1 (MQ=255) tCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATc < 4:148183/149‑1 (MQ=255) ccAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATc > 3:123280/1‑148 (MQ=255) cacaGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGc < 3:22640/149‑1 (MQ=255) ccGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGt > 7:188810/1‑148 (MQ=255) atgaaggtgcggcatggcttcagcattttgccgagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCg > 5:62798‑M1/125‑131 (MQ=255) atgaaggtgcggcatggcttcagcattttgccgagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCg < 6:62798‑M1/7‑1 (MQ=255) aCAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAg < 6:227687/149‑1 (MQ=255) cTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATcc < 8:188810/148‑1 (MQ=255) gACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAg < 2:178767/148‑1 (MQ=255) gCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGgcggcg < 4:78976/149‑1 (MQ=255) cacGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGAGTGGCACGCTCGAGCGCGTGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGGTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGTCGGCGTCGat < 8:62791/149‑1 (MQ=255) gCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATc < 4:60997/149‑1 (MQ=255) tgccgagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCgg > 5:258927‑M1/97‑148 (MQ=255) ccAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCgg > 8:193137/1‑148 (MQ=255) gagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCaa > 3:206566‑M1/93‑147 (MQ=255) gagaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCaa < 4:206566‑M1/55‑1 (MQ=255) agaacccattggccgctgttgcacttcaacatggcttggcttgcgtcgagaccgatttcagttgcccgcttgcagcggcacgcggcggggcGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGc > 1:139056‑M1/92‑149 (MQ=255) cAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGcc > 8:9754/1‑149 (MQ=255) aaGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGccc > 4:75747/1‑149 (MQ=255) gTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTg > 1:19011/1‑149 (MQ=255) gATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTg < 4:237453/146‑1 (MQ=255) gATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTg > 3:237453/1‑146 (MQ=255) tGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAggc > 4:38542/1‑104 (MQ=255) tGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAggc < 3:38542/104‑1 (MQ=255) tGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCgg > 8:41087/1‑149 (MQ=255) cGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCgg < 2:19011/147‑1 (MQ=255) cGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCgg < 7:9754/147‑1 (MQ=255) gCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACt > 6:234777/1‑149 (MQ=255) aCGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTg > 5:228054/1‑148 (MQ=255) gcgcGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGtc < 4:123280/149‑1 (MQ=255) gcgGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGtctc > 3:34630/1‑149 (MQ=255) tCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGc > 8:169772/1‑148 (MQ=255) aGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGcaagc > 3:82479/1‑149 (MQ=255) gCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCaagccaagcc < 7:41087/149‑1 (MQ=255) ccATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGc > 8:283790/1‑103 (MQ=255) ccATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGc < 7:283790/103‑1 (MQ=255) gTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGtt > 4:228474/1‑149 (MQ=255) tAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGtt < 4:82479/148‑1 (MQ=255) caatcgatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAg > 5:198735/3‑149 (MQ=255) atcgatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCg < 3:137490/118‑1 (MQ=255) atcgatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCg > 4:137490/1‑118 (MQ=255) atcgatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTg > 1:168826/1‑149 (MQ=255) tcgatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGc < 2:262184/149‑1 (MQ=255) gatcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCaa < 2:168826/149‑1 (MQ=255) atcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCaa > 7:67298/1‑148 (MQ=255) atcgCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCaa > 1:61377/1‑148 (MQ=255) aGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGcc < 3:228474/148‑1 (MQ=255) gACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAAATGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCaa > 6:316529/1‑149 (MQ=255) aCAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAAt > 2:198552/1‑149 (MQ=255) aCAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAAt < 3:75747/149‑1 (MQ=255) cAAAGGTTGTTGCCGATCGAGACGGCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATg < 6:228054/149‑1 (MQ=255) aaaGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATgg < 6:321155/149‑1 (MQ=255) aaaGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTCAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATgg > 4:43873/1‑149 (MQ=255) ggTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGtt > 2:170268/1‑149 (MQ=255) ttgttgCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTtct < 7:169772/149‑1 (MQ=255) | CCCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGATCGAGACGCCTGGTCAAGGCATCCCAGGCGGCGTCGATATCCGGCAACGCCCCGCCGCGTGCCGCTGCAAGCGGGCAACTGAAATCGGTCTCGACGCAAGCCAAGCCATGTTGAAGTGCAACAGCGGCCAATGGGTTCT > NC_002947/4695571‑4695865 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |