New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4913709 = | 46 (0.880) | 4 (0.080) | 4/246 | NT | 8.3% | coding (990/1989 nt) | ccmF | holocytochrome c synthetase |
? | NC_002947 | 4913769 = | 46 (0.960) | coding (930/1989 nt) | ccmF | holocytochrome c synthetase |
AGAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4913866‑4913709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcggcggcAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGC > NC_002947/4913769‑4913912 AGAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTG < 7:183563/149‑1 GAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGG > 6:319487/1‑149 GAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGG > 7:57715/1‑149 GACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGG < 6:90623/147‑1 ACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGG < 6:204683/149‑1 CGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGTTACCTTCCTGGTGCGTTCCGGAGAGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGC < 3:239545/148‑1 TTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAA > 5:325749/1‑128 TTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAA < 6:325749/128‑1 CCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGT > 4:122612/1‑149 GTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTG < 3:122612/149‑1 GGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTG > 1:192153/1‑149 GCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGC < 2:192153/149‑1 GCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGAT < 7:111840/140‑1 GCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGAT > 8:111840/1‑140 AGAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGAGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4913866‑4913709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcggcggcAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGC > NC_002947/4913769‑4913912 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |