| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5388759 | 46 (0.880) | 3 (0.060) | 3/256 | NT | 6.4% | coding (2269/2811 nt) | dld2 | D‑lactate dehydrogenase |
| ? | NC_002947 | = 5388784 | 43 (0.860) | coding (2294/2811 nt) | dld2 | D‑lactate dehydrogenase | |||||
TGCCGACCGCGAGCAAAGCTCGCTGCTGGACAAAACCCGCGCCCTGCTGGAAAAGGCCGGTTACCAGGTGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5388644‑5388759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgGCCTGCTCGGGGTAGCCCTTGGAGGCGAACGGTTGGCCGCAGCACAGGCTGTCGGCGTTGTCGGGGAACACCACCTGGTAACCGGCCTTTTCCAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCC < NC_002947/5388784‑5388638 TGCCGACCGCGAGCAAAGCTCGCTGCTGGACAAAACCCGCGCCCTGCTGGAAAAGGCCGGTTACCAGGTGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGGCCTGCTCGGGGTAGCCCTTGGAGGCGAACGG < 3:278646/148‑1 AGCTCGCTGCTGGACAAAACCCGCGCCCTGCTGGAAAAGGCCGGTTACCAGGTGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGGCCTGCTCGGGGTAGCCCTCGGAGGCGAAC > 3:66440/1‑130 AGCTCGCTGCTGGACAAAACCCGCGCCCTGCTGGAAAAGGCCGGTTACCAGGTGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGGCCTGCTCGGGGTAGCCCTCGGAGGCGAAC < 4:66440/130‑1 TTCGGCCTGCTCGGGGGAGCCCTTGGAGGCGAACGGTTGGCCGCAGCACAGGCTGTCGGCGTTGTCGGGGAACACCACCTGGTAACCGGCCTTTTCCAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAG < 3:13981/148‑1 TCGGCCTGCTCGGGGTAGCCCTTGGAGGCGAACGGTTGGCCGCAGCACAGGCTGTCGGCGTTGTCGGGGAACACCACCTGGTAACCGGCCTTTTCCAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGC > 5:319969/1‑149 CGGCCTGCTCGGGGTAGCCCTTGGAGGCGAACGGTTGGCCGCAGCACAGGCTGTCGGCGTTGTCGGGGAACACCACCTGGTAACCGGCCTTTTCCAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCC > 5:69520/1‑149 TGCCGACCGCGAGCAAAGCTCGCTGCTGGACAAAACCCGCGCCCTGCTGGAAAAGGCCGGTTACCAGGTGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5388644‑5388759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgGCCTGCTCGGGGTAGCCCTTGGAGGCGAACGGTTGGCCGCAGCACAGGCTGTCGGCGTTGTCGGGGAACACCACCTGGTAACCGGCCTTTTCCAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCC < NC_002947/5388784‑5388638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |