New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5456444	56 (1.080)	3 (0.060)	3/252	NT	5.0%	coding (176/2607 nt)	leuS	leucine‑‑tRNA ligase
	?	NC_002947	= 5456493	60 (1.220)					coding (225/2607 nt)	leuS	leucine‑‑tRNA ligase

CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5456290‑5456444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcggCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCGGT  <  NC_002947/5456493‑5456347                                                                                                                                                                                                                                                                                                                CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACAC                                                                                                                                                           >  3:212468/1‑149      TATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCG                                                                                                                                                      <  3:50087/149‑1                                                        TTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTC                                                                                                     <  5:264642/148‑1                                                                     AGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATG                                                                                              <  1:322115/142‑1                                                                     AGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATG                                                                                              >  2:322115/1‑142                                                                                                                                                          GGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCGGT  <  3:306953/149‑1                                                                                                                                                          GGCTGCAGGAAGTTCTTGCCCAGGATGAGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCGGT  <  6:273811/149‑1                                                                                                                                                                                                                                                                                                                CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5456290‑5456444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcggCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCGGT  <  NC_002947/5456493‑5456347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.