New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 545644456 (1.080)3 (0.060) 3/252 NT 5.0% coding (176/2607 nt) leuS leucine‑‑tRNA ligase
?NC_002947 = 5456493 60 (1.220)coding (225/2607 nt) leuS leucine‑‑tRNA ligase

TCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGACTACAT  >  NC_002947/5456297‑5456591
                                                                                                                                                   |                                                                                                                                                   
tCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGt                                                                                                                                                    <  4:131836/149‑1 (MQ=255)
tCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGt                                                                                                                                                    >  2:74807/1‑149 (MQ=255)
  gAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTTGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTg                                                                                                                                                   <  6:34325/148‑1 (MQ=255)
   aaGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGAc                                                                                                                                                 >  1:99051/1‑149 (MQ=255)
     tgctcgtcccAGAACTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGt                                                                                                                                               >  8:42045/8‑149 (MQ=255)
     gccgccgccCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGt                                                                                                                                               <  4:7133/149‑1 (MQ=255)
         ccgccCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGAtt                                                                                                                                           <  4:212468/149‑1 (MQ=255)
           gccCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGc                                                                                                                                         <  4:966/149‑1 (MQ=255)
            cccAGAAGTTCTGGGACGAGGAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGcc                                                                                                                                        <  4:72288/149‑1 (MQ=255)
             ccAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGccc                                                                                                                                       <  8:290718/149‑1 (MQ=255)
             ccAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGccc                                                                                                                                       >  1:104356/1‑149 (MQ=255)
                    ttCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCa                                                                                                                                <  2:99051/149‑1 (MQ=255)
                       tGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACAATCGGTGACGTGATTGCCCGCTACCAgc                                                                                                                              >  5:106973/1‑148 (MQ=255)
                          gACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACAATCGGTCACGTGATTCCCCGCTACCAGCCCAt                                                                                                                          >  6:770/1‑149 (MQ=255)
                               gCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTgg                                                                                                                     >  8:174401/1‑149 (MQ=255)
                                   caaTCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCaa                                                                                                                 <  7:97188/149‑1 (MQ=255)
                                      tCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGaa                                                                                                              >  5:243875/1‑149 (MQ=255)
                                        gTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAAc                                                                                                             <  2:104356/148‑1 (MQ=255)
                                         ttCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCaa                                                                                                                 >  1:223449/1‑143 (MQ=255)
                                         ttCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCaa                                                                                                                 <  2:223449/143‑1 (MQ=255)
                                         ttCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGt                                                                                                           >  5:205094/1‑149 (MQ=255)
                                            gCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCt                                                                                                        <  6:243875/149‑1 (MQ=255)
                                            gCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGAACCCGAGCGGCAAGCTACTCATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTc                                                                                                          >  6:263555/1‑147 (MQ=255)
                                                ttACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGctgcaggacgttcttgcccagcatgcgctggtagcgggcaatcacgtc                                                                                                     <  5:264642‑M1/148‑49 (MQ=255)
                                                  aCCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCTCATCCTGGGCAAGAACTTCCTGCAGcc                                                                                                  <  6:273811‑M2/149‑3 (MQ=255)
                                                  aCCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGcc                                                                                                  <  3:306953‑M2/149‑3 (MQ=255)
                                                           ccAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTg                                                                                         >  6:133256/1‑149 (MQ=255)
                                                            cAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCAGGTGCGCAACTACACCATCGGTGACGTTATTGCCCGCTACCAGCGGATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTgg                                                                                        <  5:770/149‑1 (MQ=255)
                                                             aGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGTCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACTTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCAGATGGGCTgg                                                                                        >  2:50017/1‑148 (MQ=255)
                                                             aGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGctgcaggacgttcttgcccagcatgcgctggtagcgggcaatcacgtcaccgatg                                                                                              >  2:322115‑M1/1‑87 (MQ=255)
                                                             aGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGctgcaggacgttcttgcccagcatgcgctggtagcgggcaatcacgtcaccgatg                                                                                              <  1:322115‑M1/142‑56 (MQ=255)
                                                             aGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTgg                                                                                        >  7:85512/1‑148 (MQ=255)
                                                               gCAAAGACACCTACTATTGCCTATCGGTGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGTCGATGGGCTGGGAc                                                                                     >  1:246531/1‑149 (MQ=255)
                                                                 aaaGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGc                                                                                   >  3:121012/1‑149 (MQ=255)
                                                                      cacCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCg                                                                              <  4:306953/149‑1 (MQ=255)
                                                                      cacCTACAATTGCCTATCGCTGTTCCCGTACCCGAGCGTCAAGCTACTCATGGGCCTCGTGCGGAACTACACCATCGGTGACGTTTTTGCCCGCTACCAGCGCATGCTGGGCAATAACGTCCTGCAGCCGATGGGCTTGTACGCTTTCg                                                                              <  4:5550/149‑1 (MQ=255)
                                                                       acCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCgg                                                                             <  3:92552/149‑1 (MQ=255)
                                                                       acCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCgg                                                                             <  7:42045/149‑1 (MQ=255)
                                                                         ctactaTTGCCAATCGATGTTCCCGTACCAGAGCTCAAAGCTACACATGGGCAACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACAAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCa                                                                           >  8:221335/1‑149 (MQ=255)
                                                                           actaTTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCCGCAGCCGATGGGCTGGGACGCTTTCGGCATg                                                                         >  8:56778/1‑149 (MQ=255)
                                                                                  ccTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCcgcg                                                                   <  1:74807/148‑1 (MQ=255)
                                                                                  ccTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTACGGCATGCCcgcg                                                                   >  3:204692/1‑148 (MQ=255)
                                                                                     aTCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGaaa                                                               >  3:149454/1‑149 (MQ=255)
                                                                                            ttCCCGTACCCGAGCGGCAAGCTACTCATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACgcgg                                                         <  5:263555/148‑1 (MQ=255)
                                                                                            ttCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACgcgg                                                         <  4:121012/148‑1 (MQ=255)
                                                                                            ttCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACgcgg                                                         <  7:174401/148‑1 (MQ=255)
                                                                                               ccGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGa                                                      <  4:180956/148‑1 (MQ=255)
                                                                                                     ccGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGaaaaa                                               >  5:187869/1‑149 (MQ=255)
                                                                                                      cGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGaaaaa                                               >  2:244189/1‑148 (MQ=255)
                                                                                                       gAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAaac                                              >  6:113825/1‑148 (MQ=255)
                                                                                                          cGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAaacaac                                           <  6:205094/148‑1 (MQ=255)
                                                                                                           ggCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGt                                         >  6:3433/1‑149 (MQ=255)
                                                                                                              aaGCTACACATGGGCCACGTTCGCAACTACACCATCGGTGACTTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCATCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTctc                                      <  1:50017/149‑3 (MQ=255)
                                                                                                                   acacATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCgg                                 >  3:168778/1‑149 (MQ=255)
                                                                                                                          ggCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTg                          >  3:200893/1‑149 (MQ=255)
                                                                                                                           gCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTg                          >  3:198031/1‑148 (MQ=255)
                                                                                                                              aCGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACg                      <  3:139238/149‑1 (MQ=255)
                                                                                                                                 tGCGCAACTACAGCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTAc                   <  5:113825/149‑1 (MQ=255)
                                                                                                                                    gcAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAaac                                              <  7:152418/119‑1 (MQ=255)
                                                                                                                                    gcAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAaac                                              >  8:152418/1‑119 (MQ=255)
                                                                                                                                    gcAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGa                 >  3:305286/1‑148 (MQ=255)
                                                                                                                                        cTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACa            <  4:200893/149‑1 (MQ=255)
                                                                                                                                           cacCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGTCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCTGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCGCCGGCCAAGTGGACGTACGAAAACATCg         <  5:273811/149‑1 (MQ=255)
                                                                                                                                           cacCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATc          <  6:187869/148‑1 (MQ=255)
                                                                                                                                              cATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGccgatggtgtagttgcgcacgtggcccatgtgtagcttgccgctcgggtacgggaacatcgataggcaatagtaggtgtctttgcct             >  2:322115‑M2/1‑55 (MQ=255)
                                                                                                                                              cATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGccgatggtgtagttgcgcacgtggcccatgtgtagcttgccgctcgggtacgggaacatcgataggcaatagtaggtgtctttgcct             <  1:322115‑M2/142‑88 (MQ=255)
                                                                                                                                              cATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGAc       >  5:229022/1‑148 (MQ=255)
                                                                                                                                                tCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGACTAc    <  6:229022/149‑1 (MQ=255)
                                                                                                                                                  ggctgcaggacgttcttgcccagcatgcgctggtagcgggcaatcacgtcaccgatggtgtagttgcgcacgtggcccatgtgtagcttgccgctcgggtacgggaacatcgataggcaatagtaggtgtctttgcctggctgttcggt  <  3:306953‑M1/149‑148 (MQ=255)
                                                                                                                                                  ggctgcaggaagttcttgcccaggatgagctggtagcgggcaatcacgtcaccgatggtgtagttgcgcacgtggcccatgtgtagcttgccgctcgggtacgggaacatcgataggcaatagtaggtgtctttgcctggctgttcggt  <  6:273811‑M1/149‑148 (MQ=255)
                                                                                                                                                  ggTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGACTACAt  <  5:3433/149‑1 (MQ=255)
                                                                                                                                                   gTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGACTACAt  >  6:183343/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGTGACGTGATTGCCCGCTACCAGCGCATGCTGGGCAAGAACGTCCTGCAGCCGATGGGCTGGGACGCTTTCGGCATGCCCGCGGAAAACGCGGCGATGAAAAACAACGTCGCCCCGGCCAAGTGGACGTACGAAAACATCGACTACAT  >  NC_002947/5456297‑5456591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.