New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5552330 =	47 (0.900)	5 (0.100)	4/252	NT	9.9%	coding (1559/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	5552377 =	46 (0.930)					intergenic (+40/+621)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein

GTTACCCTCTTGGGTGGGGCTTGTAGTATCTACGACCTTGTTCTTTGCTTTCAACTGGCTAGTGAGAGTTTTAAAGTGAACTTGTGATGAAGTCTAGGCACTCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5552479‑5552330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCTGAAA  >  NC_002947/5552377‑5552522                                                                                                                                                                                                                                                                                                           GTTACCCTCTTGGGTGGGGCTTGTAGTATCTACGACCTTGTTCTTTGCTTTCAACTGGCTAGTGAGAGTTTTAAAGTGAACTTGTGATGAAGTCTAGGCACTCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCC                                                                                                                                                      >  5:28510/1‑149                                                                                                  GCACTCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAA                                                      >  5:194445/1‑147                                                                                                    ACTCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGG                                                  >  4:244765/1‑149                                                                                                      TCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGG                                                 >  1:72446/1‑148                                                                                                      TCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGG                                                 >  8:87733/1‑148                                                                                                                                          AGCTTTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCG            <  3:244765/149‑1                                                                                                                                                   GCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCTGAA   <  2:72446/149‑1                                                                                                                                                    CCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCTGAAA  <  7:160549/149‑1                                                                                                                                                      TGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCGCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCTGAAA  >  1:235741/1‑148                                                                                                                                                                                                                                                                                                           GTTACCCTCTTGGGTGGGGCTTGTAGTATCTACGACCTTGTTCTTTGCTTTCAACTGGCTAGTGAGAGTTTTAAAGTGAACTTGTGATGAAGTCTAGGCACTCAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5552479‑5552330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGC‑CAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCTGAAA  >  NC_002947/5552377‑5552522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.