New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5585681 | 78 (1.500) | 3 (0.060) | 3/254 | NT | 4.0% | coding (51/2259 nt) | parC | DNA topoisomerase IV subunit A |
? | NC_002947 | = 5585706 | 71 (1.430) | coding (26/2259 nt) | parC | DNA topoisomerase IV subunit A | |||||
Rejected: Frequency below/above cutoff threshold. |
TTGTGCTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5585529‑5585681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagccTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCACCGAACAGGCCTACCTCAACTACTCCATGTACGTGATCATGGATCGTGCCTTGCCGCATATCGGCGACGGCCTGAAGCCGGTGCAGCGACGCATCGTCTACGCCATGAGCGA < NC_002947/5585706‑5585559 TTGTGCTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGT > 2:161052/1‑148 TTGTGCTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGT > 5:291115/1‑148 CTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGC > 3:141667/1‑147 CTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGC > 5:126814/1‑147 ACGATGTGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC > 5:170910/1‑145 ACGATGTGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC < 6:170910/145‑1 CATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACT < 6:22381/73‑1 GCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCACCGAACAGGCCTACCTCAACTACTCCATGTACGTGATCATGGATCGTGCCTTGCCGCATATCGGCGACGGCCTGAAGCCGGTGCAGCGACGCATCGTCTACGCCATGAGC < 6:307187/149‑1 CCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCACCGAACAGGCCTACCTCAACTACTCCATGTACGTGATCATGGATCGTGCCTTGCCGCATATCGGCGACGGCCTGAAGCCGGTGAAGCGACGCATAGTCTACGCCATGAGCG > 7:10689/1‑149 CTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCACCGAACAGGCCTACCTCAACTACTCCATGTACGTGATCATGGATCGTGCCTTGCCGCATATCGGCGACGGCCTGAAGCCGGTGCAGCGACGCATCGTCTACGCCATGAGCGA < 1:295439/149‑1 TTGTGCTTGGCATCGGCATCGAGCCCCAACTCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5585529‑5585681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagccTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCACCGAACAGGCCTACCTCAACTACTCCATGTACGTGATCATGGATCGTGCCTTGCCGCATATCGGCGACGGCCTGAAGCCGGTGCAGCGACGCATCGTCTACGCCATGAGCGA < NC_002947/5585706‑5585559 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |