New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 558568178 (1.500)3 (0.060) 3/254 NT 4.0% coding (51/2259 nt) parC DNA topoisomerase IV subunit A
?NC_002947 = 5585706 71 (1.430)coding (26/2259 nt) parC DNA topoisomerase IV subunit A
Rejected: Frequency below/above cutoff threshold.

TCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACC  >  NC_002947/5585559‑5585853
                                                                                                                                                   |                                                                                                                                                   
tCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAg                                                                                                                                                    <  1:295439‑M2/149‑2 (MQ=255)
 cGCTCATGGCGTAGACTATGCGTCGCTTCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAgg                                                                                                                                                   >  7:10689‑M2/1‑147 (MQ=255)
  gCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAggc                                                                                                                                                  <  6:307187‑M2/149‑4 (MQ=255)
           gTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTc                                                                                                                                           >  7:94774/1‑147 (MQ=255)
           gTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTc                                                                                                                                           >  1:49990/1‑147 (MQ=255)
              gACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGACACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGt                                                                                                                                       <  6:159392/148‑1 (MQ=255)
               aCGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGTACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGa                                                                                                                                     <  5:306673/149‑1 (MQ=255)
                cGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGa                                                                                                                                     <  4:218837/148‑1 (MQ=255)
                      gTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTc                                                                                                                              <  1:161052/149‑1 (MQ=255)
                        cGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCAt                                                                                                                            >  3:99765/1‑149 (MQ=255)
                         gCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATg                                                                                                                           >  6:108175/1‑149 (MQ=255)
                          cTGCACCGGCTTCAGGCGGTCGCCGATATGCGGGAAGGCACGATCCATGATCTCGTAGATGGAGTAGTTGAGGTAGGCCTGTTCGTTGAAGTCAGCCAGCGAGAGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGc                                                                                                                          <  2:236382/149‑1 (MQ=255)
                             cACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCg                                                                                                                         <  7:106157/147‑1 (MQ=255)
                             cACCGGCTTCAGGCCGTCACCGATATGCGGCAAGGCACGATCCATGATCTCGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCggg                                                                                                                       >  4:90794/1‑149 (MQ=255)
                              aCCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGc                                                                                                                      <  2:13405/149‑1 (MQ=255)
                                cGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCt                                                                                                                    >  6:189157/1‑149 (MQ=255)
                                 ggCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTc                                                                                                                   <  2:295439/149‑1 (MQ=255)
                                      cAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTc                                                                                                                <  5:108175/147‑1 (MQ=255)
                                        ggCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGGGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCatta                                                                                                            <  8:269295/149‑1 (MQ=255)
                                         gCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCattat                                                                                                           <  5:43772/149‑1 (MQ=255)
                                            gTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTAttt                                                                                                         >  2:49594/1‑148 (MQ=255)
                                            gTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGACGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTc                                                                                                        <  4:9894/149‑1 (MQ=255)
                                                ccGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGt                                                                                                    <  5:307187/149‑1 (MQ=255)
                                                   atatGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCt                                                                                                 <  1:289665/149‑1 (MQ=255)
                                                       gCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGCGTTCCAGTTAGTCGCTCATGCTGGCCTCGGCATTATTTCAGGTTCTGgcg                                                                                             >  3:4677/1‑149 (MQ=255)
                                                       gCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGc                                                                                                                      <  5:283623/124‑1 (MQ=255)
                                                       gCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGc                                                                                                                      >  6:283623/1‑124 (MQ=255)
                                                           cAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGACCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCgcagc                                                                                         <  2:153035/149‑1 (MQ=255)
                                                           cAAGGCACGAGCCATGCTCACGTACATGGAGTAGTTGCGGTCGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCgcagc                                                                                         <  4:4677/149‑1 (MQ=255)
                                                            aaGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAg                                                                                                                                        <  3:7976/101‑1 (MQ=255)
                                                            aaGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAg                                                                                                                                        >  4:7976/1‑101 (MQ=255)
                                                            aaGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCgcagca                                                                                        <  6:126814/149‑1 (MQ=255)
                                                                 aCGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATg                                                                                   >  8:187433/1‑149 (MQ=255)
                                                                   gATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGt                                                                                 >  5:203506/1‑149 (MQ=255)
                                                                   gATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGt                                                                                 >  3:145490/1‑149 (MQ=255)
                                                                     tCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCTTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGc                                                                               <  1:49594/149‑1 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCt                                                                                                                               >  8:115007/1‑98 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCt                                                                                                                               <  7:119285/98‑1 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCt                                                                                                                               >  8:119285/1‑98 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCt                                                                                                                               <  7:115007/98‑1 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTGAGTATTTAAGGTTCTGGAGCCGCAGCATGGTGccgc                                                                            >  4:249486/1‑147 (MQ=255)
                                                                        aTGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCAc                                                                            >  3:76129/1‑149 (MQ=255)
                                                                            tCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCgcag                                                                                          >  1:25493/1‑131 (MQ=255)
                                                                            tCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCgcag                                                                                          <  2:25493/131‑1 (MQ=255)
                                                                                 tACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTggg                                                                   <  4:141667/149‑1 (MQ=255)
                                                                                   cATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGt                                                                  >  2:31232/1‑148 (MQ=255)
                                                                                    aTGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGACAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTa                                                                 >  8:14469/1‑148 (MQ=255)
                                                                                          tagtTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCaa                                                          <  6:206376/149‑1 (MQ=255)
                                                                                             ttGAGGTAGGCCTCATCGGTGAAGTCAGCCAGCGAGCTCCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGACGCTCATGCGGCCCTCGTCATTATTTCAGGTTCTGGCCCAGCAGCATCGTGCCACCGAGCTGGGTAAATTCAAgtt                                                       >  5:523/1‑149 (MQ=255)
                                                                                              tGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAgtt                                                       <  2:266866/148‑1 (MQ=255)
                                                                                                 ggTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGttgttg                                                   <  3:74471/149‑1 (MQ=255)
                                                                                                  gTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGttgttg                                                   >  8:30237/1‑148 (MQ=255)
                                                                                                     ggCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAgg                                               <  4:99765/149‑1 (MQ=255)
                                                                                                     ggCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAg                                                <  1:31232/148‑1 (MQ=255)
                                                                                                      gCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCaa                                                          <  8:40050/137‑1 (MQ=255)
                                                                                                      gCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCaa                                                          >  7:40050/1‑137 (MQ=255)
                                                                                                      gCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAggg                                              <  7:30237/149‑1 (MQ=255)
                                                                                                        cTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCa                                            >  1:313654/1‑149 (MQ=255)
                                                                                                        cTGTACGTTGAAGTCATGCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCTTCATTATTTCAGGTTCTGGCGCAGCAGCATTGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCa                                            <  8:94774/149‑1 (MQ=255)
                                                                                                           ttCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTaaa                                                               <  8:29768/127‑1 (MQ=255)
                                                                                                           ttCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTaaa                                                               >  7:29768/1‑127 (MQ=255)
                                                                                                            tCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATCGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCa                                        >  2:278215/1‑149 (MQ=255)
                                                                                                              ggTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCAt                                       <  6:203506/148‑1 (MQ=255)
                                                                                                              ggTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCAt                                       <  7:14469/148‑1 (MQ=255)
                                                                                                              ggTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATg                                      >  3:247345/1‑149 (MQ=255)
                                                                                                               gTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAggctgacttcaccgaacaggcctacctcaactactccatgtacgtgatcatggatcgtgccttgccgcatatcggcgacggcctgaagccggtgcagcgacacatcgt                                         <  6:170910‑M2/145‑109 (MQ=255)
                                                                                                               gTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAggctgacttcaccgaacaggcctacctcaactactccatgtacgtgatcatggatcgtgccttgccgcatatcggcgacggcctgaagccggtgcagcgacacatcgt                                         >  5:170910‑M2/1‑37 (MQ=255)
                                                                                                                tGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGcc                                    <  6:192217/149‑1 (MQ=255)
                                                                                                                tGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGcc                                    >  3:206230/1‑149 (MQ=255)
                                                                                                                tGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGcc                                    <  4:247345/149‑1 (MQ=255)
                                                                                                                  aaGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGccc                                   <  4:145490/148‑1 (MQ=255)
                                                                                                                   aGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAggctgacttcaccgaacaggcctacctcaactactccatg                                                                                                             <  6:22381‑M2/73‑41 (MQ=255)
                                                                                                                    gTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCcagc                                <  4:76129/149‑1 (MQ=255)
                                                                                                                       agccagcGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCcagcag                              >  1:20063/1‑148 (MQ=255)
                                                                                                                            gcgagcgGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGt                        <  2:20063/149‑1 (MQ=255)
                                                                                                                                gcggcgTTCGACGCCGTCCAGGCTGAGTTCCAGTCAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGAc                    <  1:173012/149‑1 (MQ=255)
                                                                                                                                     gTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATc               >  1:81796/1‑149 (MQ=255)
                                                                                                                                         gACGCCGTCCAGGCTGAGTTCCAGTGAGGCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAg            <  6:101283/148‑1 (MQ=255)
                                                                                                                                          aCGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCAttcgaa           >  3:263438/1‑143 (MQ=255)
                                                                                                                                                  cAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGcacc  <  3:90794/149‑1 (MQ=255)
                                                                                                                                                  cAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGcac   <  5:189157/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCGCTCATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAAGTCAGCCAGCGAGCGGCGTTCGACGCCGTCCAGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACC  >  NC_002947/5585559‑5585853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.