New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5787981	53 (1.020)	3 (0.060)	3/254	NT	5.5%	coding (788/900 nt)	ynfL	DNA‑binding transcriptional regulator
	?	NC_002947	= 5788004	53 (1.070)					coding (765/900 nt)	ynfL	DNA‑binding transcriptional regulator

GGCAGTGGGGCAATGACCAGTGCCATTTGACCGGCATCACGCCTGACCGACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5787833‑5787981 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgaAGGGGTGGTGTACCGCACCTTGCTCGATGAAGAGGCGATGACGGCGGTGTGGCTGGTGCAGCGCGAGCGTGGTCATTCGGTCATGGCCAAGGCATTTGCCGAGTTGTTGACAGGGCAGGTGGTCGGTCAGGCGTGATGCCGGT  <  NC_002947/5788004‑5787862                                                                                                                                                                                                                                                                                                      GGCAGTGGGGCAATGACCAGTGCCATTTGACCGGCATCACGCCTGACCGACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGA                                                                                                                                                 <  1:312647/149‑1                                   CATCACGCCTGACCGACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGAAGGCGTGGTGTACCGCACCTTGCTCGATGAAGAG                                                                                                               <  1:26837/149‑1                                                 GACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGAAGGGGTGGTGTACCACACCTTGCTCGATGAAG                                                                                                                 >  5:80747/1‑133                                                 GACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGAAGGGGTGGTGTACCACACCTTGCTCGATGAAG                                                                                                                 <  6:80747/133‑1                                                                                                                                                 ATCGAAGGGGTGGTGTACCGCACCTTGCTCGATGAAGAGGCGATGACGGCGGTGTGGCTGGTGCAGCGCGAGCGTGGTCATTCGGTCATGGCCAAGGCATTTGCCGAGTTGTTGACAGGGCAGGTGGTCGGTCAGGCGTGATGCCGGT  >  6:131778/1‑148                                                                                                                                                                                                                                                                                                      GGCAGTGGGGCAATGACCAGTGCCATTTGACCGGCATCACGCCTGACCGACCACCTGCCCTGTCAACAACTCGGCAAATGCCTTGGCCATGACCGAATGACCACGCTCGCGCTGCACCAGCCACACCGCCGTCATCGCCTCTTCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5787833‑5787981 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgaAGGGGTGGTGTACCGCACCTTGCTCGATGAAGAGGCGATGACGGCGGTGTGGCTGGTGCAGCGCGAGCGTGGTCATTCGGTCATGGCCAAGGCATTTGCCGAGTTGTTGACAGGGCAGGTGGTCGGTCAGGCGTGATGCCGGT  <  NC_002947/5788004‑5787862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.