New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5866389 =	42 (0.810)	4 (0.080)	4/244	NT	8.0%	coding (156/444 nt)	PP_5140	MerR family transcriptional regulator
	?	NC_002947	5866470 =	54 (1.130)					coding (237/444 nt)	PP_5140	MerR family transcriptional regulator

CTCCTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATGCTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5866542‑5866389 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcggcagCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAAC  >  NC_002947/5866470‑5866617                                                                                                                                                                                                                                                                                                                CTCCTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATGCTCGATATGCTCGTCGATCAGCTCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGGCCAGCGTGC                                                                                                                                                           <  6:82372/149‑1  TCCTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATGCTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCG                                                                                                                                                          >  6:1030/1‑149    CTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATGCTCGATATGCTCGTCGATCAGCGAATTGACGCTGCCGCACCCGAAGTCGGGGCTGTCGCGCAGGCGTAGAAGGCAGCGAATTTCGTCCAGGTTCATGTCCAGCCTGCGt                                                                                                                                                         >  8:216367/1‑147    CTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATCCTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGG                                                                                                                                                         <  4:224682/148‑1                                           CTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGG                                                                                                                                                         <  7:156565/109‑1                                           CTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGG                                                                                                                                                         >  8:156565/1‑109                                                                           TGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGGCAGCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTG                                                                                   >  1:154866/1‑147                                                                                 ACGCGTGGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGGCAGCGTCAATGCGCTGATCGCCGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAG                                                                             >  6:90837/1‑147                                                                                                             TAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGGCAGCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAAC                                               <  2:154866/149‑1                                                                                                                       CGAATTTCGTCCAGGGTCAGGTCCAGCGGGCGGCAGCGTCAATGCGCTGATCGACGAGCATATCGAGCAGGTGCAGGCGCGGATCGATGGCGTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGA                                     <  5:90837/149‑1                                                                                                                                                     CGGCAGCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGA       <  2:123064/149‑1                                                                                                                                                        CAGCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACA     >  1:169460/1‑148                                                                                                                                                          GCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAAC  <  5:71895/149‑1                                                                                                                                                                                                                                                                                                                CTCCTGCAATGCCACCAAGCCATCGATCCGCGCCTGAACATGCTCGATATGCTCGTCGATCAGCGCATTGACGCTGCCGCACGCGTCGTCGGGGCTGTCGCGCAGGCGTAGCAGGCTGCGAATTTCGTCCAGGGTCATGTCCAGCGTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5866542‑5866389 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcggcagCGTCAATGCGCTGATCGACGAGCATATCGAGCATGTTCAGGCGCGGATCGATGGCTTGGTGGCATTGCAGGAGCAGCTGGTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAAC  >  NC_002947/5866470‑5866617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.