New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 594286247 (0.900)4 (0.080) 4/252 NT 7.7% coding (248/978 nt) PP_5210 alcohol dehydrogenase
?NC_002947 = 5942894 51 (1.030)coding (280/978 nt) PP_5210 alcohol dehydrogenase

GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5942711‑5942862
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgaACGCACCCCAGCCGGTGAGCGCCATGACCCGGTCGCCGACC  <  NC_002947/5942894‑5942854
                                                                                                                                                                                                 
GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATTGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTC                                                <  3:298803/147‑1
GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGG                                              >  1:98860/1‑149
GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGG                                              >  3:202430/1‑149
GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGG                                              <  6:21100/149‑1
 ACGTGCAAGCTGCCGGTGGCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGC                                             <  6:33417/149‑1
          CTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGAACGCACC                                    >  3:171071/1‑149
                                             GAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGAACGCACCCCAGCCGGTGAGCGCCATGACCCGGTCGCCGACC  <  4:171071/148‑1
                                                                                           GCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGAACGCACCCCAGCCGGTGAGCGCCATGAC               <  1:191001/89‑1
                                                                                           GCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGAACGCACCCCAGCCGGTGAGCGCCATGAC               >  2:191001/1‑89
                                                                                                                                                                                                 
GACGTGCAAGCTGCCGGGGTCAACTTCCCCGACACCTTGATCATCGAAGGCAAGTACCAGTTCCAGCCGCCGCTGCCGTTCTCTCCAGGTGGCGAGGCAGCGGGCGTGGTGGCCGCCGTCGGCGAAAAGGCCGGCGCGTTCAAGGTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5942711‑5942862
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgaACGCACCCCAGCCGGTGAGCGCCATGACCCGGTCGCCGACC  <  NC_002947/5942894‑5942854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.