New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 896262 = | 48 (0.920) | 4 (0.080) | 4/256 | NT | 8.3% | coding (153/1191 nt) | PP_0778 | group 1 family glycosyl transferase |
? | NC_002947 | 896342 = | 42 (0.840) | coding (73/1191 nt) | PP_0778 | group 1 family glycosyl transferase |
CCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAGGGTAATACGTAGGGCGGGTGTA > NC_002947/896114‑896409 | ccTCGGTGGCGAAGTACAGTAAATACGGGCGCTGCCGGCGCCAGCTGCGCAACAGCTTGTGCATCGACACATCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCTGCTGAGGAACGTTGTGCACGTGc > 6:55204/1‑149 (MQ=255) cTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGcc > 5:17233/1‑149 (MQ=255) cggcagtcaggcgtcatctttacgtcacaaggcggtcacattagcgcaacccggcaggcggaaactttttgtcatgaatacacccgccctacgtattaccctggtcagcgaaaccttcccacccgagatcaatggtgtggccaacaccc > 2:309679‑M1/147‑149 (MQ=255) acagtacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTgg > 6:101282/1‑149 (MQ=255) atctttacgtcacaaggcggtcacattagcgcaacccggcaggcggaaactttttgtcatgaatacacccgccctacgtattaccctggtcagcgaaaccttcccacccgagatcaatggcgtggccaacaCCCTTCGCCGGCCTGgcg < 1:263877‑M1/18‑1 (MQ=255) gtacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACGGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGgcgc > 2:322880/1‑149 (MQ=255) tacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGcgcg > 2:153501/1‑149 (MQ=255) gcgcTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGcacca < 8:220638/149‑1 (MQ=255) gcgcTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGcacca > 6:150482/1‑149 (MQ=255) gcTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGcaccac > 2:290590/1‑148 (MQ=255) ccGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCTGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGa < 6:184529/149‑1 (MQ=255) ggCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGAcc < 1:316313/149‑1 (MQ=255) ggCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGAcc < 6:17233/149‑1 (MQ=255) cAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATg < 2:22859/149‑1 (MQ=255) cggcgCAACAGGTTGTGCATCTACACCTCGCCCAACTGCAAACCCGGGTAGCCCGGCAGCGCGCAGCCACGGCACAGCATCAGCTGCTGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGAGCGGGCGCACCACCTCGACCTCATGGcc < 6:14497/149‑1 (MQ=255) cggcgCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGcc < 3:27349/149‑1 (MQ=255) gcgcAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCcgc < 5:150104/149‑1 (MQ=255) gcAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAACTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCcgc < 4:55683/147‑1 (MQ=255) gcAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAACTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCcgc > 3:55683/1‑147 (MQ=255) cAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGgc < 5:116137/149‑1 (MQ=255) ttGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCaa > 8:103798/1‑149 (MQ=255) gCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATAAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGCCCTCATGGCCGCGTTGGCGCAA‑CCCa > 2:248501/1‑149 (MQ=255) tCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCACCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGCGCGCACCACCACGACCTCATGGCCGCGTTGCCGCAA‑CCCATCa > 8:207560/1‑149 (MQ=255) cGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCAc > 8:72430/1‑149 (MQ=255) cacCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACGGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGa < 1:322880/149‑1 (MQ=255) cTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCt > 2:34317/1‑110 (MQ=255) cTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCt < 1:34317/110‑1 (MQ=255) cTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggc < 7:129720/149‑1 (MQ=255) cTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggc > 7:233292/1‑149 (MQ=255) cTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggc < 8:160026/149‑1 (MQ=255) tcatgaatacacccgccctatgtattaccctggtcagcgaaaccttcccacccgagatcaatggcgtggccaacaCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTgaggcgac < 1:246915‑M1/74‑3 (MQ=255) gCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggcggc > 3:141208/1‑149 (MQ=255) cccACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggcg < 5:5521/145‑1 (MQ=255) cccACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAggcg > 6:5521/1‑145 (MQ=255) aCTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAgg < 7:207560/149‑1 (MQ=255) aCTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAgg < 3:141978/149‑1 (MQ=255) atacacccgccctacgtattaccctggtcagcgaaaccttcccacccgagatcaatggcgtggccaacaCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAgg > 2:263877‑M1/70‑148 (MQ=255) cAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGgtgt < 7:72430/149‑1 (MQ=255) acccgccctatgtattaccctggtcagcgaaaccttcccacccgagatcaatggcgtggccaacaCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGACCAAGGGTGtt > 2:246915‑M1/66‑149 (MQ=255) aaaCCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGtt > 4:231384/1‑149 (MQ=255) aaCCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTg < 1:290590/149‑1 (MQ=255) ccGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGcc > 8:126279/1‑149 (MQ=255) gggTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCAc < 5:101282/149‑1 (MQ=255) cGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGa > 4:235058/1‑149 (MQ=255) gCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGAtc < 1:153501/149‑1 (MQ=255) gcgcCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCg < 4:218607/149‑1 (MQ=255) cgcCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCgg < 8:233292/149‑1 (MQ=255) gcCCAGCCACGGCACAGCGTCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCggg > 2:323466/1‑149 (MQ=255) gcCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCggg < 3:231384/149‑1 (MQ=255) cccAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGt < 2:40054/149‑1 (MQ=255) cccAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGt < 4:244296/149‑1 (MQ=255) ccAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTg < 6:251272/149‑1 (MQ=255) cACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGGACCACCTCGACCTCATGGCCGCGTTGGCGCAACCCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGaa < 1:248501/149‑1 (MQ=255) gCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGttt < 4:141208/149‑1 (MQ=255) acaGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCg < 7:126279/149‑1 (MQ=255) cGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAGGGTAATACGTAGGGCGGgt < 7:103798/149‑1 (MQ=255) gTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAgg > 3:249316/1‑130 (MQ=255) gTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAgg < 4:249316/130‑1 (MQ=255) gCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAGGGTAATACGTAGGGCGGGTGTa < 3:269369/149‑1 (MQ=255) | CCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAA‑CCCATCACTGAGGCGGCCAAGGGTGTTGGCCACGCCATTGATCTCGGGTGGGAAGGTTTCGCTGACCAGGGTAATACGTAGGGCGGGTGTA > NC_002947/896114‑896409 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |