New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 981623	36 (0.690)	6 (0.120)	6/254	NT	13.7%	coding (500/1863 nt)	hscA	DnaK‑like molecular chaperone
	?	NC_002947	= 981649	41 (0.830)					coding (526/1863 nt)	hscA	DnaK‑like molecular chaperone

GGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTACTTTCGATATTTC  >  NC_002947/981488‑981770                                                                                                                                        |                                                                                                                                                    ggCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCa                                                                                                                                        <  2:168302/149‑1 (MQ=255)      aaaaGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGcgcg                                                                                                                                   >  6:142636/1‑149 (MQ=255)          gCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtcttt                                                                                                                               >  1:253449‑M1/1‑127 (MQ=255)           cccTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtctttg                                                                                                                              >  8:158283‑M1/1‑126 (MQ=255)           cccTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTgg                                                                                                                              >  5:29279/1‑149 (MQ=255)            ccTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggc                                                                                                                             <  6:268240/149‑1 (MQ=255)                tgGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCAGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtctttggtagc                                                                                                                         <  6:59842‑M1/149‑29 (MQ=255)                   aaGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtctttggtagcctg                                                                                                                      <  4:36125‑M1/149‑32 (MQ=255)                   aaGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGgcctg                                                                                                                      >  4:32149‑M2/1‑144 (MQ=255)                        tCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtctttggtagcctgacgtt                                                                                                                 <  2:253449‑M1/149‑37 (MQ=255)                            ccGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCcggccagacgcgctgcgtctttggtagcctgacgttgg                                                                                                               <  7:158283‑M1/147‑39 (MQ=255)                            ccGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGtg                                                                                                                <  3:207735/146‑1 (MQ=255)                             cGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCACAAAACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGtgctgc                                                                                                            >  1:272051/1‑149 (MQ=255)                                    cTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGc                                                                                                      >  7:104467/1‑148 (MQ=255)                                    cTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCACCTGCt                                                                                                     <  3:92658/149‑1 (MQ=255)                                     tGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGc                                                                                                      <  4:132020/147‑1 (MQ=255)                                     tGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGc                                                                                                      >  3:132020/1‑147 (MQ=255)                                     tGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCt                                                                                                     >  7:281633/1‑148 (MQ=255)                                       aaGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCaa                                                                                                  <  2:88585/149‑1 (MQ=255)                                                      cGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGgc                                                                                   >  2:250907/1‑149 (MQ=255)                                                       gggCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCt                                                                                                                                                    <  3:107949/83‑1 (MQ=255)                                                       gggCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCt                                                                                                                                                    >  4:107949/1‑83 (MQ=255)                                                              aGCCACCTTGGGTGGCGAGCTGGTAGGAGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTTGCCGGCCTGAACGTGCTGCGCATGCTAAACGAAACGACTGCGGCCGCCGTAg                                                                           >  1:180738/1‑149 (MQ=255)                                                                 cACCTTGGGTGGCGAGCTGTTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACt                                                                                        <  4:116435/133‑1 (MQ=255)                                                                 cACCTTGGGTGGCGAGCTGATAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACt                                                                                        >  3:116435/1‑133 (MQ=255)                                                                    cTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACg                                                                     >  2:133988/1‑149 (MQ=255)                                                                    cTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACg                                                                     >  7:205624/1‑149 (MQ=255)                                                                       gggTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGc                                                                   <  8:104467/148‑1 (MQ=255)                                                                          tGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTgg                                                               <  1:139841/149‑1 (MQ=255)                                                                                    gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGc                                                     >  3:29419/1‑149 (MQ=255)                                                                                        gcgcGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGaa                                                 <  1:133988/149‑1 (MQ=255)                                                                                            ggTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCg                                             <  6:29279/149‑1 (MQ=255)                                                                                                            gcctATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGa                             >  3:67852/1‑149 (MQ=255)                                                                                                              ctATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATc                           >  7:55093/1‑149 (MQ=255)                                                                                                               tATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCt                          >  1:277782/1‑149 (MQ=255)                                                                                                                 tttCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTgg                        >  3:213572/1‑149 (MQ=255)                                                                                                                  ttCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTggg                       >  5:281352/1‑149 (MQ=255)                                                                                                                     gATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGggcgg                    >  4:292527/1‑149 (MQ=255)                                                                                                                       tGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGgcggcg                  >  3:72385/1‑149 (MQ=255)                                                                                                                       tGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGgcggcg                  >  3:158811/1‑149 (MQ=255)                                                                                                                           gCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTAc              >  8:277130/1‑149 (MQ=255)                                                                                                                           gCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTAc              >  6:6695/1‑149 (MQ=255)                                                                                                                             ccAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGgcctgacgttgggcgtcatcgaaataggcaggcacggtgatcaccgcgcctaccagctcgccacccaaggtggcttcggcccgttcgcgcaacaccttcaggatgtcgg              <  7:158283‑M2/147‑110 (MQ=255)                                                                                                                              cAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTACttt           <  3:111032/149‑1 (MQ=255)                                                                                                                               aaCGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGgcctgacgttgggcgtcatcgaaataggcaggcacggtgatcaccgcgcctaccagctcgccacccaaggtggcttcggcccgttcgcgcaacaccttcaggatgtcggcaga          <  2:253449‑M2/149‑114 (MQ=255)                                                                                                                               aaCGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTACTTTc          <  4:213572/149‑1 (MQ=255)                                                                                                                                 cGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTACTTTCGa        <  2:34297/149‑1 (MQ=255)                                                                                                                                    cAGGCcggccagacgcgctgcgtctttggtagcctgacgttgggcgtcatcgaaataggcaggcacggtgatcaccgcgcctaccagctcgccacccaaggtggcttcggcccgttcgcgcaacaccttcaggatgtcggcagacactt     >  4:32149‑M1/1‑5 (MQ=255)                                                                                                                                    cAGGCTACCAAAGACGCAGCGCGTCTGGCCGgcctgacgttgggcgtcatcgaaataggcaggcacggtgatcaccgcgcctaccagctcgccacccaaggtggcttcggcccgttcgcgcaacaccttcaggatgtcggcagacactt     <  4:36125‑M2/149‑119 (MQ=255)                                                                                                                                       gCTACCAAAGACGCAGCGCGTCTGGCCGgcctgacgttgggcgtcatcgaaataggcaggcacggtgatcaccgcgcctaccagctcgccacccaaggtggcttctgcccgttcgcgcaacaccttcaggatgtcggcagacacttcca  <  6:59842‑M2/149‑122 (MQ=255)                                                                                                                                        |                                                                                                                                                    GGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGCGTGGTGGCCATCTATGATCTGGGCGGCGGTACTTTCGATATTTC  >  NC_002947/981488‑981770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.