New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1256376 =	43 (0.830)	4 (0.080)	4/250	NT	8.6%	coding (718/1095 nt)	mrp	ATP‑dependent Fe‑S cluster transferase
	?	NC_002947	1256462 =	45 (0.920)					coding (804/1095 nt)	mrp	ATP‑dependent Fe‑S cluster transferase

CCCAATGGTGTCTGGCGCGCTGCTGCAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCG  >  NC_002947/1256228‑1256517                                                                                                                                                     |                                                                                                                                              cccAATGGTGTCTGGCGCGCTGCTGCAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTca                                                                                                                                               <  4:161375/149‑1 (MQ=255) cccAATGGTGTCTGGCGCGCTGCTGCAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTca                                                                                                                                               <  7:295625/149‑1 (MQ=255)    ggcctgctcacgtatcagcatcgacaacggcagcgacgccagcaggtcgacgccatactggctggccagcttctcgccgccaccctcaccgaacaggtgttcggcatggccgcaattcgagcagatatgcacggccatgttctcgACCa                                                                                                                                            <  4:282419‑M1/4‑1 (MQ=255)     aTGGTGTCTGGCGAGCTGCTGCAACTGGTCACCCAGACCGCCTGGCATGACCTGGATTACTTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTTGTCGGTTCGGTGAACGTcaccac                                                                                                                                           >  5:101360/1‑149 (MQ=255)                 gcgcTGCTGCAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCt                                                                                                                               >  3:17560/1‑149 (MQ=255)                         gcAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCgctgc                                                                                                                       >  5:22602/1‑149 (MQ=255)                          cAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCgctgct                                                                                                                      <  1:10454/149‑1 (MQ=255)                           aagtGGTCACCCAGACCGCCTTGGATTACCTGGATTACCTGGTGATCGTTATGCCTCCGGGTACCGGTGACATCCAGCTGACCATGGCACAAAAGGTACCGTTGGTCGGTTCTGTGATCGTCACCACGCCGCAGGACCTGGCgctgct                                                                                                                      <  6:101360/145‑1 (MQ=255)                                gTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGc                                                                                                                <  1:168886/149‑1 (MQ=255)                                     ccAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCaag                                                                                                            >  2:136187/1‑148 (MQ=255)                                     ccAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCaag                                                                                                            >  3:243312/1‑148 (MQ=255)                                      cAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCaagaa                                                                                                          <  7:248065/149‑1 (MQ=255)                                      cAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCaag                                                                                                            >  4:287765/1‑147 (MQ=255)                                          ccGCCTGGGATGACCTGGATTATCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCAAAGAAGGGc                                                                                                      >  7:48421/1‑149 (MQ=255)                                                      aCCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTg                                                                                                   >  6:101728/1‑140 (MQ=255)                                                      aCCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTg                                                                                                   <  5:101728/140‑1 (MQ=255)                                                       ccTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTcc                                                                                         <  1:136187/149‑1 (MQ=255)                                                           gATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCaa                                                                                     <  7:216228/149‑1 (MQ=255)                                                                     tGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTc                                                                                          <  5:226367/134‑1 (MQ=255)                                                                     tGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTc                                                                                          >  6:226367/1‑134 (MQ=255)                                                                       agctggatGTCACCGGTACCCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTcc                                                                         >  6:99873/7‑149 (MQ=255)                                                                        tCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTcc                                                                         <  6:22602/148‑1 (MQ=255)                                                                         cGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAAGATTCCgg                                                                       >  4:81962/1‑149 (MQ=255)                                                                          ttctcgccgccaccctcaccgaacaggtgttcggcatggccgcaattcgagcagatatgcacggccatgttctcgACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGt                                                                      <  3:232483‑M1/74‑1 (MQ=255)                                                                           tgcacccACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTTGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTg                                                                     <  1:115954/144‑1 (MQ=255)                                                                            gatGTCACCGGTACCCGGTGGCATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGc                                                                    >  3:151671/2‑149 (MQ=255)                                                                                 cACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGc                                                               >  5:54479/1‑149 (MQ=255)                                                                                   ccGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGt                                                             >  8:97617/1‑149 (MQ=255)                                                                                     gggTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTgg                                                           <  6:60726/149‑1 (MQ=255)                                                                                       cctcaccgaacaggtgttcggcatggccgcaattcgagcagatatgcacggccatgttctcgACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTc                                                         >  4:232483‑M1/63‑149 (MQ=255)                                                                                           cGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCgaga                                                     <  7:97617/149‑1 (MQ=255)                                                                                               aacaggtgttcggcatggccgcaattcgagcagatatgcacggccatgttctcgACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAATGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTgg                                                                 >  5:62524‑M1/55‑133 (MQ=255)                                                                                               aacaggtgttcggcatggccgcaattcgagcagatatgcacggccatgttctcgACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAATGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTgg                                                                 <  6:62524‑M1/79‑1 (MQ=255)                                                                                                aCATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACAt                                                 <  2:260997/148‑1 (MQ=255)                                                                                                 cATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATgg                                               <  4:17560/149‑1 (MQ=255)                                                                                                  aTCCAGCTGACCCTGCCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGACGCAGGACCTGGCCCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGAGTGGTCGAGAACATGGc                                              >  5:141058/1‑149 (MQ=255)                                                                                                     cAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGt                                           <  6:54479/149‑1 (MQ=255)                                                                                                       gCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGc                                         <  3:287765/149‑1 (MQ=255)                                                                                                        cTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCa                                        >  6:257976/1‑149 (MQ=255)                                                                                                        cTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCa                                        >  1:69597/1‑149 (MQ=255)                                                                                                             ccTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCa                                        >  3:157606/1‑144 (MQ=255)                                                                                                             ccTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCa                                        <  4:157606/144‑1 (MQ=255)                                                                                                             ccTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGAGGAAATGTTCCGCAAGGTCAACATTCCGGAGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCt                                   >  5:234020/1‑149 (MQ=255)                                                                                                                 gCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCt                                <  2:69597/148‑1 (MQ=255)                                                                                                                     aaaaGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAAt                           >  2:57969/1‑149 (MQ=255)                                                                                                                                      ggttcggtGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAaca          >  3:11505/1‑149 (MQ=255)                                                                                                                                      ggttcggtGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAac           <  4:243312/148‑1 (MQ=255)                                                                                                                                         tcggtGATCGTCACCACGCCGCAGGACCTGGCGCTGGTGGATGCCAACAAGGTCGTGGAAATGTTCCGGAATGTGAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTGGAATTGCGGCCATGCCGAacacg        <  6:141058/148‑2 (MQ=255)                                                                                                                                             tGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCga                                                       <  7:61128/97‑1 (MQ=255)                                                                                                                                             tGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCga                                                       >  8:61128/1‑97 (MQ=255)                                                                                                                                               aTCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCg  <  8:48421/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              CCCAATGGTGTCTGGCGCGCTGCTGCAACTGGTCACCCAGACCGCCTGGGATGACCTGGATTACCTGGTGATCGATATGCCACCGGGTACCGGTGACATCCAGCTGACCCTGGCACAAAAGGTACCGGTGGTCGGTTCGGTGATCGTCACCACGCCGCAGGACCTGGCGCTGCTGGATGCCAAGAAGGGCGTGGAAATGTTCCGCAAGGTCAACATTCCGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCG  >  NC_002947/1256228‑1256517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.