New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1330937 =	NA (NA)	5 (0.100)	4/256	NT	NA	coding (162/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	1330981 =	NA (NA)					coding (206/1644 nt)	PP_1157	acetolactate synthase

GGTGTCGAGTATGTATTCGGCATTCCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGAC  >  NC_002947/1330821‑1330969                                                                                                                     |                                 ggggtCGAGTATGTATTCGGCATTCCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGTGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGAAAGAc  <  5:223198/146‑1 (MQ=0)                                                                                                                     |                                 GGTGTCGAGTATGTATTCGGCATTCCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGAC  >  NC_002947/1330821‑1330969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.