New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1717676	52 (1.000)	4 (0.080)	4/252	NT	7.3%	coding (375/777 nt)	rsmJ	ribosomal RNA small subunit methyltransferase J
	?	NC_002947	= 1717706	52 (1.050)					coding (405/777 nt)	rsmJ	ribosomal RNA small subunit methyltransferase J

GCGGTGGCAACGGGCAGATGATCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGGCGCCGCAGGTGATCT  >  NC_002947/1717531‑1717824                                                                                                                                                  |                                                                                                                                                     gCGGTGGCAACGGGCAGATGATCGCCACGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCg                                                                                                                                                   <  4:205731/149‑1 (MQ=255)    gTGGCAACGGGCAGATGATCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCt                                                                                                                                                 >  4:299134/1‑148 (MQ=255)    gTGGCAACGGGCAGATGATCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCt                                                                                                                                                 <  3:299134/148‑1 (MQ=255)             ggCAGATGATCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCcgcg                                                                                                                                       <  3:186486/149‑1 (MQ=255)                 gatgatCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCgctgc                                                                                                                                   >  7:147001/1‑149 (MQ=255)                       cGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGCCAAGGACGCGTACGTGCTGGCCCGCCGTGGCGGCCAGATGAACGTGCTCGAGCGCAAGCAGCTGATTGCCGCTGTTCTggagg                                                                                                                             >  6:259174/1‑149 (MQ=255)                         ccAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGAc                                                                                                                           >  4:6818/1‑149 (MQ=255)                         ccAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGAc                                                                                                                           >  4:2321/1‑149 (MQ=255)                            aGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGc                                                                                                                        <  2:277441/149‑1 (MQ=255)                                     gCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTggcgcgg                                                                                                               <  8:147001/149‑1 (MQ=255)                                           cccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGgccgtcctccagcagcgcggcaatcagcggctggcgct                                                                                                                >  7:108941‑M1/1‑104 (MQ=255)                                           cccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGgccgtcctccagcagcgcggcaatcagcggctggcgct                                                                                                                <  8:108941‑M1/142‑39 (MQ=255)                                           cccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTggcgcgggcgc                                                                                                           >  5:185317/1‑147 (MQ=255)                                           cccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTggcgcgggcgc                                                                                                           >  5:202709/1‑147 (MQ=255)                                            ccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGgccgtcctccagcagcgcggcaatcagcggctggcgc                                                                                                                 >  3:270603‑M1/1‑103 (MQ=255)                                            ccAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGgccgtcctccagcagcgcggcaatcagcggctggcgc                                                                                                                 <  4:270603‑M1/140‑38 (MQ=255)                                             cAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGc                                                                                                       <  6:202709/149‑1 (MQ=255)                                                   aTCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATg                                                                                                  >  1:140817/1‑148 (MQ=255)                                                                  cTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGa                                                                                   <  1:316193/148‑1 (MQ=255)                                                                   tGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGAtt                                                                                 >  7:37748/1‑149 (MQ=255)                                                                      aTGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTc                                                                              <  6:51503/149‑1 (MQ=255)                                                                         ccACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCggg                                                                           >  4:276901/1‑149 (MQ=255)                                                                          cACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGgc                                                                          <  2:140817/149‑1 (MQ=255)                                                                          cACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGgc                                                                          >  6:46065/1‑149 (MQ=255)                                                                          cACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGgc                                                                          >  4:41655/1‑149 (MQ=255)                                                                            cggcggGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGgcgc                                                                        <  6:185317/149‑1 (MQ=255)                                                                            cggcggGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCGTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGgcgc                                                                        <  5:251708/149‑1 (MQ=255)                                                                               cggGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATg                                                                     >  6:294321/1‑149 (MQ=255)                                                                               cggCGCTGGGCAACTCCCCGTTCGCGCCGGCCAGCCTTGGCCGCCAGAGGACCCTGAGCGCGCTCCAGCCGCTGCTTGCCGCGCTGATGGAGGACGGCCTGGCGCGGGCGCGAGCGGAGGAAGAAGTGGGCCCGATTGTCGGGCGCATg                                                                     <  4:262657/149‑1 (MQ=255)                                                                                  ggCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATgcgc                                                                  >  2:261114/1‑149 (MQ=255)                                                                                      gggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCctgc                                                              >  6:184242/1‑149 (MQ=255)                                                                                      gggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCctgc                                                              >  1:267267/1‑149 (MQ=255)                                                                                       ggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTc                                                                              >  7:215569/1‑132 (MQ=255)                                                                                       ggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTc                                                                              <  8:215569/132‑1 (MQ=255)                                                                                       ggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCctgc                                                              <  8:37748/148‑1 (MQ=255)                                                                                       ggCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCctg                                                               <  6:246809/147‑1 (MQ=255)                                                                                          aaGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGAc                                                          <  3:6818/149‑1 (MQ=255)                                                                                          aaGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGAc                                                          <  3:2321/149‑1 (MQ=255)                                                                                                       tGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGAtt                                                                                 >  7:43194/1‑113 (MQ=255)                                                                                                       tGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGAtt                                                                                 <  8:43194/113‑1 (MQ=255)                                                                                                       tGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGCCCGGCACCGcactc                                             >  1:117429/1‑145 (MQ=255)                                                                                                       tGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATc                                             <  5:103598/149‑1 (MQ=255)                                                                                                          tGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCGGATTGTCGGGCGCATGCGCCTGCTGGCCGGCAACGCCATCGAg                                          >  7:183111/1‑149 (MQ=255)                                                                                                          tGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAg                                          >  1:138360/1‑149 (MQ=255)                                                                                                            gCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAgc                                         <  3:41655/148‑1 (MQ=255)                                                                                                                   ttGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATgcgc                                 >  8:292457/1‑149 (MQ=255)                                                                                                                      gCTGCCAGATGACCCTGTTCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGcc                              >  2:269576/1‑149 (MQ=255)                                                                                                                          ccAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGTCCGGCAACGCCATCGAGCGCATGCGCGCCTgg                           <  5:294321/148‑1 (MQ=255)                                                                                                                           cAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAgc                                         >  1:2771/1‑133 (MQ=255)                                                                                                                           cAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAgc                                         <  2:2771/133‑1 (MQ=255)                                                                                                                                 aCCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAgggg                    <  5:46065/148‑1 (MQ=255)                                                                                                                                     tGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGgcg               >  8:54520/1‑149 (MQ=255)                                                                                                                                        tCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCa                                      <  8:71335/123‑1 (MQ=255)                                                                                                                                        tCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCa                                      >  7:71335/1‑123 (MQ=255)                                                                                                                                        tCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGGcgccg            >  5:138005/1‑149 (MQ=255)                                                                                                                                          gAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCGGGGAAGGGGAGGcgccg            >  8:247187/1‑147 (MQ=255)                                                                                                                                           aGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCctggcgctcgatcagggtcatctggcagccaaggctggccagcacgaacgcgtccttgcccagccccgccgtggcatccagtacctgcggccggataccttggg                <  8:108941‑M2/142‑105 (MQ=255)                                                                                                                                           aGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCctggcgctcgatcagggtcatctggcagccaaggctggccagcacgaacgcgtccttgcccagccccgccgtggcatccagtacctgcggccggataccttggg                >  7:108941‑M2/1‑38 (MQ=255)                                                                                                                                            gcgcCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCctggcgctcgatcagggtcatctggcagccaaggctggccagcacgaacgcgtccttgcccagccccgccgtggcatccagtacctgcggccggataccttgg                 >  3:270603‑M2/1‑37 (MQ=255)                                                                                                                                            gcgcCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCctggcgctcgatcagggtcatctggcagccaaggctggccagcacgaacgcgtccttgcccagccccgccgtggcatccagtacctgcggccggataccttgg                 <  4:270603‑M2/140‑104 (MQ=255)                                                                                                                                            gcgcCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGGCGCCGCAgg        >  2:298875/1‑149 (MQ=255)                                                                                                                                             cgcCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACg                                                  >  8:178629/1‑106 (MQ=255)                                                                                                                                             cgcCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACg                                                  <  7:178629/106‑1 (MQ=255)                                                                                                                                                  gCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGGCGCCGCAGGTGATCt  <  3:281896/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCGGTGGCAACGGGCAGATGATCGCCAAGGCTGTGGGCATTGCCCAAGGTATCCGGCCGCAGGTACTGGATGCCACGGCGGGGCTGGGCAAGGACGCGTTCGTGCTGGCCAGCCTTGGCTGCCAGATGACCCTGATCGAGCGCCAGCCGCTGATTGCCGCGCTGCTGGAGGACGGCCTGGCGCGGGCGCGAGCGGATGAAGAAGTGGGCCCGATTGTCGGGCGCATGCGCCTGCTGACCGGCAACGCCATCGAGCGCATGCGCGCCTGGGAAGGGGAGGCGCCGCAGGTGATCT  >  NC_002947/1717531‑1717824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.