New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3101333	37 (0.710)	4 (0.080)	4/252	NT	10.7%	coding (634/681 nt)	PP_2710	hypothetical protein
	?	NC_002947	= 3101419	32 (0.650)					coding (53/807 nt)	PP_2711	short‑chain dehydrogenase/reductase family oxidoreductase

TCAGCTCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGC  >  NC_002947/3101193‑3101478                                                                                                                                             |                                                                                                                                                  tCAGCTCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCcg                                                                                                                                           >  7:10717/1‑149 (MQ=255)    gCTCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGt                                                                                                                                        >  6:133119/1‑149 (MQ=255)     cTCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTg                                                                                                                                       <  6:94043/149‑1 (MQ=255)      tCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGc                                                                                                                                      >  5:253270/1‑149 (MQ=255)        gCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCg                                                                                                                                    <  1:115010/149‑1 (MQ=255)        gCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCg                                                                                                                                    >  5:140643/1‑149 (MQ=255)          aCGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCTCGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCggg                                                                                                                                  <  5:225042/149‑1 (MQ=255)            ggTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGgca                                                                                                                                <  3:164631/149‑1 (MQ=255)                 gcTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGgcagc                                                                                                                              >  5:211688/1‑146 (MQ=255)                 gcTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAag                                                                                                                           <  6:319652/149‑1 (MQ=255)                   tCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAagag                                                                                                                         >  5:180144/1‑149 (MQ=255)                                  tGGTGACCTACAAACGGTTGATGGATCGCCTCGCCGATGCCGGTGCCCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTGCACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGttt                                                                                                          >  6:66124/1‑149 (MQ=255)                                    gTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTgg                                                                                                        <  6:211688/149‑1 (MQ=255)                                         cTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCt                                                                                                      >  2:193767/1‑146 (MQ=255)                                         cTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGa                                                                                                    <  1:193767/148‑1 (MQ=255)                                               aCGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCgtg                                                                                             <  5:145781/149‑1 (MQ=255)                                               aCGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCgtg                                                                                             <  6:140643/149‑1 (MQ=255)                                                cGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCgtgg                                                                                            <  6:180144/149‑1 (MQ=255)                                                                 cgacgaTGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGcctatgcccccactggcgccggtgaggatcaccacggactcagccaaccgcatggtgcacctcttgctgccc                                                                           >  7:190642‑M1/1‑77 (MQ=255)                                                                      aTGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTgg                                                                      >  8:126396/1‑149 (MQ=255)                                                                                   gcagGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGcctg                                                         <  1:45599‑M2/149‑5 (MQ=255)                                                                                     agGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGcctatgcccccactggcgccggtgaggatcaccacggactcagccaaacgcatggtgcacctcttgctgcccggcacgcggcaagccctgga                                                       <  8:190642‑M1/149‑93 (MQ=255)                                                                                        ccGTCCTCCCCGCGGCCAAGGTCGTCTACCGCTTGTCCACCGCGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCTTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAAtt                                                    <  5:165109/149‑1 (MQ=255)                                                                                        ccGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAAtt                                                    <  5:133119/149‑1 (MQ=255)                                                                                         cGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTg                                                   <  7:126396/149‑1 (MQ=255)                                                                                            cctccACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGGGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTgg                                                  <  6:253270/147‑1 (MQ=255)                                                                                                         aaGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTgcg                                   >  1:153862/1‑149 (MQ=255)                                                                                                            gtcgtcTACCGCTTGTACACCGAGATGTTCCAGGcctatgcccccactggcgccggtgaggatcaccacggactcagccaaacgcatggtgcacctcttgctgcccggcacgcggcaagccctggaacatc                                                  <  1:309590‑M1/131‑98 (MQ=255)                                                                                                            gtcgtcTACCGCTTGTACACCGAGATGTTCCAGGcctatgcccccactggcgccggtgaggatcaccacggactcagccaaacgcatggtgcacctcttgctgcccggcacgcggcaagccctggaacatc                                                  >  2:309590‑M1/1‑34 (MQ=255)                                                                                                                tcTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCgg                            >  7:69569/1‑149 (MQ=255)                                                                                                                  tACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACCGCTCTGCGCTGCCGGTg                          >  8:40707/1‑149 (MQ=255)                                                                                                                    ccGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGcc                        >  6:170421/1‑149 (MQ=255)                                                                                                                    ccGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGcc                        >  4:119196/1‑149 (MQ=255)                                                                                                                           tACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGgtgt                 <  2:45599/149‑1 (MQ=255)                                                                                                                               ccGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGCTCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGATGTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGc             >  6:323092/1‑149 (MQ=255)                                                                                                                                cGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAAc                                            <  4:171609/117‑1 (MQ=255)                                                                                                                                cGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAAc                                            >  3:171609/1‑117 (MQ=255)                                                                                                                                cGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGcc            >  6:15724/1‑149 (MQ=255)                                                                                                                                  agaTGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGt          <  8:10717/149‑1 (MQ=255)                                                                                                                                   gaTGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGcctggaacatctcggtgtacaagcggtagacgac                           >  2:309590‑M2/1‑97 (MQ=255)                                                                                                                                   gaTGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGcctggaacatctcggtgtacaagcggtagacgac                           <  1:309590‑M2/131‑35 (MQ=255)                                                                                                                                       ttCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTc     >  2:133472/1‑149 (MQ=255)                                                                                                                                       ttCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTc     <  5:170421/149‑1 (MQ=255)                                                                                                                                        tCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGcctggaacatctcggtgtacaagcggtagacgaccttggccgcgtggaggacggcct    <  8:190642‑M2/149‑58 (MQ=255)                                                                                                                                        tCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTc     <  3:119196/148‑1 (MQ=255)                                                                                                                                          cAGGcctatgcccccactggcgccggtgaggatcaccacggactcagccaaacgcatggtgcacctcttgctgcccggcacgcggcaagccctggaacatctcggtgtacaagcggtagacgaccttggccgcgtggaggacggcctgc  <  1:45599‑M1/149‑146 (MQ=255)                                                                                                                                             |                                                                                                                                                  TCAGCTCGCACGGTGCGCTCGACCAGGAGCACATGGTGACCTACAAACGGTTGATGGATCGCCTCGACGATGCCGGTGACCAGCAGGCCGTCCTCCACGCGGCCAAGGTCGTCTACCGCTTGTACACCGAGATGTTCCAGGGCTTGCCGCGTGCCGGGCAGCAAGAGGTGCACCATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGC  >  NC_002947/3101193‑3101478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.