New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3255679 =46 (0.880)7 (0.140) 5/254 NT 13.6% coding (59/2202 nt) PP_2852 sulfatase domain‑containing protein
?NC_002947 3255714 = 45 (0.910)coding (24/2202 nt) PP_2852 sulfatase domain‑containing protein

CGCCCAGGCCAGCAGCACGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTT  >  NC_002947/3255534‑3255825
                                                                                                                                                 |                                                                                                                                                  
cgccCAGGCCAGCAGCACGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATcaccagca                                                                                                                                                 <  6:132394/149‑1 (MQ=255)
 gggcccgttcgcacaggcccggctttggttacaagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCAc                                                                                                                                                <  5:8068‑M1/5‑1 (MQ=255)
 gccCAGGCCAGCAGCACGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATcaccagcac                                                                                                                                                >  2:214223/1‑149 (MQ=255)
     aGGCCAGCAGCACGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCaga                                                                                                                                            <  1:16361/149‑1 (MQ=255)
                aCGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGt                                                                                                                                 >  1:326925/1‑149 (MQ=255)
                aCGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGt                                                                                                                                 >  3:218723/1‑149 (MQ=255)
                  gggCAGCGCCAGCCACCACGGCCTGCTGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTgg                                                                                                                               <  3:100341/149‑1 (MQ=255)
                     cAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCaa                                                                                                                            <  1:189439/149‑1 (MQ=255)
                          tggttacaagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCgg                                                                                                                       <  4:215138‑M1/30‑1 (MQ=255)
                          tggttacaagccttgtaactggccgccttccctgccatggaatgatataatcaagcacagatgcatgacgatttaatggcaaaagggaattttttttgaataacctgtaagaaaacccaAGCACCAGAGCAGCCAAAGTGGCAAGCCgg                                                                                                                       <  4:219354‑M1/30‑1 (MQ=255)
                           cagccaCCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCggg                                                                                                                      >  4:35036/1‑149 (MQ=255)
                            agccaCCACGGCCTTCGGTGTAGCAGCACTTTCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAAGCCAGCATGGCGCGCGTACCTAGTGGGATCACCAGGACCATAGCCGCCAAAGTGGCAAGCCGGGt                                                                                                                     <  8:48765/149‑1 (MQ=255)
                            agccaCCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAAGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGt                                                                                                                     <  7:194683/149‑1 (MQ=255)
                                 aagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCtt                                                                                                                 <  5:242317‑M1/36‑1 (MQ=255)
                                 aagccttgtaactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCtt                                                                                                                 >  6:242317‑M1/113‑148 (MQ=255)
                                  gacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg                                                                                                               <  4:218723/148‑1 (MQ=255)
                                  cacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg                                                                                                               <  2:326925/149‑1 (MQ=255)
                                  cacGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTgg                                                                                                               >  4:315954/1‑149 (MQ=255)
                                        cTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc                                                                                                         >  3:160257/1‑149 (MQ=255)
                                         taacttgactcattccctgccctgtcctgatatcatcaagcacagatgcatgacgatttaatgtaaaaagggaattttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc                                                                                                         >  3:219354‑M1/105‑148 (MQ=255)
                                         taactggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTc                                                                                                         >  3:215138‑M1/105‑148 (MQ=255)
                                         tGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCg                                                                                                        >  2:159150/1‑149 (MQ=255)
                                            ggTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGAc                                                                                                     <  1:214223/149‑1 (MQ=255)
                                            ctggccgccttccctgccctggcctgatatcatcaagcacagatgcatgacgatttaatggcaaaagggaagtttttgtgaagaacctgtccgaccacccaAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGAc                                                                                                     >  3:205221‑M1/102‑149 (MQ=255)
                                                             aaCAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaaa                                                                                     <  2:211618/148‑1 (MQ=255)
                                                                 ggCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTcc                                                                                <  6:134059/149‑1 (MQ=255)
                                                                           ggCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCAt                                                                      <  3:35036/149‑1 (MQ=255)
                                                                              gagaTCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTa                                                                    >  6:134553/1‑148 (MQ=255)
                                                                              gagaTCGGACAGGTAAACGAACGTGTTTGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCAAAAGTTGCAAGCCGTGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa                                                                   <  6:276536/149‑1 (MQ=255)
                                                                                        aGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaa                                                                                      <  5:40570/120‑1 (MQ=255)
                                                                                        aGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACaaaa                                                                                      >  6:40570/1‑120 (MQ=255)
                                                                                          gTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCAt                                                       <  3:89817/149‑1 (MQ=255)
                                                                                                 aaCGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCt                                                >  4:158865/1‑149 (MQ=255)
                                                                                                     ggTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTtgat                                            <  4:160257/149‑1 (MQ=255)
                                                                                                       ttGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTtgatga                                          >  6:177532/1‑149 (MQ=255)
                                                                                                          gACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGatat                                       >  5:123522/1‑149 (MQ=255)
                                                                                                          gACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGatat                                       >  3:269852/1‑149 (MQ=255)
                                                                                                            ccAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGatat                                       >  5:94521/1‑147 (MQ=255)
                                                                                                             cAACCCAGCATGGCGCGCGTACCCAGTGGGATCACTAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAg                                    <  4:71486/149‑1 (MQ=255)
                                                                                                             cAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAg                                    <  1:159150/149‑1 (MQ=255)
                                                                                                                 ccAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTc                                                             <  1:187702/120‑1 (MQ=255)
                                                                                                                 ccAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTc                                                             >  2:187702/1‑120 (MQ=255)
                                                                                                                   aGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa                                                                   <  5:19508/112‑1 (MQ=255)
                                                                                                                   aGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTaa                                                                   >  6:19508/1‑112 (MQ=255)
                                                                                                                     cATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCcaggg                             >  8:187723/1‑148 (MQ=255)
                                                                                                                                tACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcgg                 <  3:315954/149‑1 (MQ=255)
                                                                                                                                tACCCAGGGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcgg                 <  8:205233/149‑1 (MQ=255)
                                                                                                                                 aCCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcggc                >  8:137371/1‑149 (MQ=255)
                                                                                                                                   ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcggc                >  2:93237/1‑147 (MQ=255)
                                                                                                                                   ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcggc                >  7:236296/1‑147 (MQ=255)
                                                                                                                                   ccAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAggcggc                >  2:219786/1‑147 (MQ=255)
                                                                                                                                          gATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACaa       <  6:123522/149‑1 (MQ=255)
                                                                                                                                          gATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACaa       <  8:236296/149‑1 (MQ=255)
                                                                                                                                           aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg      <  5:177532/149‑1 (MQ=255)
                                                                                                                                           aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg      <  1:219786/149‑1 (MQ=255)
                                                                                                                                           aTCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAg      >  6:8068/1‑149 (MQ=255)
                                                                                                                                               ccagcaccagAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGCCAGGGAAGGCGGCCAGTTACAAGGCtt  >  2:152076/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CGCCCAGGCCAGCAGCACGGGCAGCGCCAGCCACCACGGCCTGCGGTGTAGCAGCACTATCAACAGGCTGCCGAGGGCGAGATCGGACAGGTAACCGAACGGGTTGGACCAACCCAGCATGGCGCGCGTACCCAGTGGGATCACCAGCACCAGAGCCGCCAAAGTGGCAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTT  >  NC_002947/3255534‑3255825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.